Ll_transcript_531158

• Id Trinity: TRINITY_DN50062_c5_g2_i1
• Name Transcript: Ll_transcript_531158
• Sequence: GGCTCGGACATGATTGCCTCTGGTTATAAGACAACAAAAATGAGTGATTCTCTCTCCTTTCACTCTCTCCCTCTGTGTAGATACTATGCTTATGGTTATG GAGAGTGAAATGGGTGTTATGCTAATGTGGTGGTGTTGAAACAATGGCTCACCATCATAATCAAAATGCCAACAACAACAACAACAAAACTCAAGAACAA CAACACATAATTCTACATGACTTTATGGGCATGAACAACTTTCCTCATTCTTCTCAAAACCCTCATCTCACCTTCTCTGACCCTTCACCCTCTTCACCAT CACGTGCCCCCTTCTCTTCCTCCATCTCTGACATCGCTTCTGAAAAACAGGTAGGAAATCACCTTGAGGGAGTTCCATTCTATGGCCCAAGGAGCGATTT TTCCGGCACTGAGATTAGTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACTTTTATTGGTTCCTCTAGAGATGCCTTCCAAATGGTCCCT GATTCCTTTCATAACTCACATTTAATGAAGATGCTCCGGAATGCAGGTGGAGGAGGAGAACGAGTTAGAAGGCCAAATGATGATGAAGTGTTACTTGGTA TGCAGTCAACGAAGCCAAGTTCGGCTTCTCAGATGTTCCAGCCTCCAACAGGCACTAAGGTTGATGCCAGTAAACGGGAGCGATCTATTCTCGTACAGCA TCCACAACATGGAGGGCAAATGACACCTTTTGTCCACCAAATAACTTCAAACAAGCTTAGGGATGCCAATGCTGGACCTTCATTTATTTCTCAGCCAGCT GCTGATGAAGGATCTAGAACTGGAATCAAGTGCCCCGGAATCTTAAATTCTATGAACACAACCACTACCGCCCCTGAGAAAGTGTCGCCCGTGGTGCTAT ATGGTGGAAGCAGGCCAAAACACGTAACTAATGTAATGGATCCAGAATCTTCATCACCTCAGAGTCAACAGGGGCTAACATCCGGCAGCCGCCAGATGAC TATTTTTTACGGAGGTCAAGCTCATGTTTTTGATTATGTCCACCCTCATAAGGCAGATGTTATAATGTCTTTAGCTGGGTCGAATAGTGGATCTTGGTCC ACAGCATTCTCACAAAAATCTGCCGGAAAACTGATTAGTGATAGCAACTTGCACAGCGGAGAAAATGAAATAGGTATGGTAAGTAATGTGCCATTACCGC ACGAGCTTCATGGGAGATTGTCTATTACCGGAAGTTCTAGTCATGCCGTTGGGCACAGTGATCGAGTTTCTACTCCTGCAGGGGCATACCAAGGAAGCAT TGTAGCTAAAGATACAAGAAAGCATGTTCAAACAACAGATCCCAGTTCAGAAGCCTGAAAGGGTTTCAGTTCCTATTTATTATCAGCTCAAGAGCTTTCT CTTGGATATCATCTTCTTTCTTTGTCAAATCCTCATGTGATGTAAAAATAGGCCTAACATATATATGATATATTAGATAAAATTAAATTTGTGAAGTGCA TTCAACTTTAAAAATATCTTATGCCAGTTTCTAAATGCATTTCACATGAGGAGATGAAGCTCCTTTGTATTATTGAAGCCCAAGTGATGACATTGTCTTT GTCTTGTGTTAGTTCTGTGTTCATGTTATTTGATAATATTATACCCTCAAAATAGGGATATGTTAATATTCTTTTATACTAGTATCTCT
• Tissue: pods
• Gene name: LI_gene_174404;
• Additional information: details;

Expression of Ll_transcript_531158

FPKM

• PAB: 2.3
• PNAB: 3.5
• PS1: 8.3
• PS2: 5.8
• PS3: 9.5
• PW1: 3.4
• PW2: 3.1
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531158

• Blastp: Protein TIFY 8 from Arabidopsis with 36.08% of identity
• Blastx: Protein TIFY 8 from Arabidopsis with 38.3% of identity
• Eggnog: TIFY domain protein 8(ENOG41123AX)
• Kegg: Link to kegg annotations (AT4G32570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416510.1)
• Pfam: tify domain (PF06200.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;