Ll_transcript_531163

• Id Trinity: TRINITY_DN50062_c5_g2_i3
• Name Transcript: Ll_transcript_531163
• Sequence: GAAAGAGAGAGGACAAGAAAGACAAACATGCGCCCCCTTTAATCTCAACACAACACAACACAACACAACTATTTCAAAACAATTTACCTTTTTCCTTTTA TATTCTCTCTCTTTCACACACAAAATCATTTCTTTCTCCCTCTCTCTCTCTCTCAGTGTATGTGTGTGTGGAGTTAGTAACAGTGCTCATGGAGAGTGAA ATGGGTGTTATGCTGCTATGGTGGTTGTGCTGAAACTATGGCTCACCACCATAATCAAAATGCCAACAACAACAAAACTCAACAACAACAACACATAGTT TTACATGACTTTCTGGGCATGAAGAAATTTTCTGATTCTCCTCAAAACCCTCATCTTGGCCTTTCTGACCCTTCACCCTCTTCAGCATCACGTGGCCCCT TTTCATCTTCTACCTCTGATATAGCTTCTGAAAAACAGGTAGGGAATCACCTTGAGGGAGTTCCATTCTATGGCCCAAGGAACGATTTTTCTAGCACCGA GATTAGTAACAGACTAGTGGGAAACAAGAGAAGTAATTCTGATTCTACTTTTATTGGTACATCTAGAGATGCCTCTCAAATGGTCCCTGACTCCTTTCAG AGCTCACATTTGATGAAGATGCTCCGCAGTGTAGGTGGAGGAGGAGATCGGCTTAGAAGGCCAAATGACGATGAAGTGTTACTTGGGATGCAGTCAACAA AGCCAACTTTTGCTTCTCAGATGTTCCAGCCTCTCACCAGCACTAAGGTTGATGCTAATAAATGGGAACGATCTATTCTCATGAATACTGGCCCTTCTGT GCATCATCCACCGCGTGGTGGGCAATTGACACCATTTGTCCACCAGTTAGCTTCAAACAAGATTAAGGATGCCAATGCCGGACCTTCATTTATCTCCCAG CCAGGTCCTTCATTTATCTCTCAGTCAGCTGCTGACGAAGGATCTAGAACCGGAATCAAAGGCCCTGGAATTTTGAATTCTATAAACATGGCTGCTACTG CTACCGAGAAAATTTCATCTTCCGTACCGCTTGGTGTTAGCAGACCAATGCATGTAACTAATGTAATGGACCCAGAGTCTTCTGCACCTCCAAGTCAGCA AGGGCTAACATCTGCCAGCCGCCAGATGACTATTTTTTACGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCCTCATAAGGCAGATGTTATAATGGCT TTAGCTGGATCAAATGGTGGATCTTGGTCTACAGCATTCTCACCAAAATCTGCTGGTAAGCTGGTTAGTGATAGTAGCTTGCATTGTGGAGAAAATGAAA CTGGTATAGCGAGTAACGTGCCATTGCCACTGGAACTTCATGGGAGATTGTCTATTACTGGCAGTTCAAGCCATGCCATAGGTCCCGGTGATCGAGTATC TACTCCAGCAGGGGCAAACAAAGGAAGCATTGTAGCAAAAGAGACAAGAAAGCCTATTGAAGCAGCAGATCCCAGTTCTGAAGCCTGAAAGGATTTCAGT TCCTATTTATTATCAGTTTAAGAGCTCTCTTATTCTGATTATTGTTATTGGATATCATCTTTTTTGTCATATTTTCATGTGCTGTTTAAACAGGCCTAAT ATATTTATGATACATGAGATAAATTAAATTTGTGAAGTGCATTCAACTTTAAAAATATCTTATGCCAGTTTCTAAATGCATTTCACATGAGGAGATGAAG CTCCTTTGTATTATTGAAGCCCAAGTGATGACATTGTCTTTGTCTTGTGTTAGTTCTGTGTTCATGTTATTTGATAATATTATACCCTCAAAATAGGGAT ATGTTAATATTCTTTTATACTAGTATCTCT
• Tissue: pods
• Gene name: LI_gene_174404;
• Additional information: details;

Expression of Ll_transcript_531163

FPKM

• PAB: 5
• PNAB: 19.4
• PS1: 12.3
• PS2: 8.9
• PS3: 12.6
• PW1: 7.5
• PW2: 6.4
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_531163

• Blastp: Protein TIFY 8 from Arabidopsis with 34.02% of identity
• Blastx: Protein TIFY 8 from Arabidopsis with 36.13% of identity
• Eggnog: TIFY domain protein 8(ENOG41123AX)
• Kegg: Link to kegg annotations (AT4G32570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437690.1)
• Pfam: tify domain (PF06200.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;