| Id Trinity | TRINITY_DN50067_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_531816 |
| Sequence | CTAACCTTTCTCGCTGTAACACTCAACTGAGTTTGGAATTGCGACTCTTCTAACAAAGTTGAGAACTTTGCTTCCAACCACAAATTTCATCAAAGATCAA AGGATAGAGAGAGAGAGAGAGAGTAATGGATAAGGTGAGAATAGAAGAGGTTCAATCCAACACCAAGAAGCAGCGTGTTGCTACTCACACTCACATCAAA GGCCTTGGTCTTGAGCCGAGTGGAAGAGCATTGCCTTTTGCTGCTGGCTTTGTTGGACAAGCAGAGGCGAGAGAAGGGGCAGGCCTTGTGGTTGATATGA TACGCCAGAAGAAGATGGCAGGTCGGGCACTCCTCCTTGCTGGACCACCTGGAACTGGCAAGACTGCATTAGCCCTTGGGATCAGTCAGGAGCTTGGGAC CAAGGTTCCATTTTGCCCAATGGTTGGCTCAGAAGTATACTCATCGGAAGTGAAGAAAACGGAGGTTCTGATGGAAAATTTCCGCCGTGCTATTGGTCTA CGTATCAAGGAAAATAAGGAGGTTTATGAAGGAGAGGTAACTGAGCTCACCCCAGAAGAAACTGAAAGCGTAACAGGTGGTTATGGTAAAAGTATTAGCC ATGTGATAATTGGATTGAAAACCGTGAAAGGAACCAAACAGCTGAAGTTGGATCCCACCATATATGATGCATTGATTAAGGAAAAGGTAGTTATTGGCGA TGTCATATACATCGAAGCTAATAGTGGAGCTGTGAAAAGGGTGGGCCGTAGTGATGCTTATGCTACAGAGTTTGACCTTGAAGCAGAAGAATATGTCCCA CTTCCTAAGGGAGAGGTTCACAAAAAAAAGGAGATTGTTCAGGATGTAACCCTACACGATCTGGATGCTGCCAATGCACGACCTCAAGGTGGGCAAGATA TTCTGTCTCTTATGGGCCAAATGATGAAACCCAGGAAAACAGAAATCACTGACAAGTTGAGACAAGAAATTAACAAGGTTGTCAACCGGTATATTGAGGA GGGTGTAGCAGAGCTTGTCCCAGGAGTTCTATTTATTGATGAGGTACACATGCTAGATATGGAGTGTTTTTCGTATCTAAATCGTGCTTTAGAGAGCTCT CTATCTCCAATTGTAGTCCTTGCTACAAATAGAGGAATATGCAATGTAAGAGGGACTGACATGGCCAGTCCTCATGGCATACCTGTTGACCTGTTGGATC GATTGGCGATCATTCGAACACAGACTTATGGTCCTGCTGAAATGATACAGATTTTAGCCATCCGTGCTCAAGTTGAGGATCTGGTTGTGGACGAGGAATG TTTGGCTTCCCTTGGAGAGATCGGACAACGGTCATCTTTGAGGCATGCGGTTCAACTTTTATCACCTGCCAGCATTGTAGCCAAAATGAACGGCCGAGAC AACATCTGCAAGGCGGATCTTGACGAAGTGTGTTCGCTATATTTGGATGCCAAGTCATCAGCCAAGCTTCTTCAAGAGCAGCAGGAAAAATACATCATAT GATATTATTTTTGATATGTTGCAAAGACATGGTATTGAGTTTGAAGAAGAATGTATGGTTTGAATGTTGCTTCTCAACTCTGTTTTATGCATGGCTGCTA TAGTTGACTTGTATAATATATCCTTATCTTTCATTCATGTAATGGTAGCACTGGACTTAAAGAACAAGCATATGACAGAGTTGATTGAAGTTTGTTTTAA GATTAGTTTTCATCACTTTATGACAATTGAAAATGTAATGATGCCATTTGTTTCCTATACATTGTTTTATCTTAGTTTGTGGTTATAGTTCTATGGATAG AAGACCTTATCCTATGCATGAATATATGTAAGTAGGAATATTTAGGTGATAAATAATAATGATAATTAACTAGTATTAGTTAATAAAGTAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_174447; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_531816
| Blastp | RuvB-like protein 1 from Arabidopsis with 89.5% of identity |
|---|---|
| Blastx | RuvB-like protein 1 from Arabidopsis with 89.5% of identity |
| Eggnog | ruvB-like(COG1224) |
| Kegg | Link to kegg annotations (AT5G22330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436439.1) |
| Pfam | TIP49 C-terminus (PF06068.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |