Ll_transcript_533150

• Id Trinity: TRINITY_DN50068_c2_g2_i2
• Name Transcript: Ll_transcript_533150
• Sequence: CTCTCTCTCTCTCTTTCTCAACTCTCTCAGCTTCAGCTTATTTTTCTGGTAGGCCATGTTCTAAACCAATACCTTATTTTCCACAAATTATGTTTTTTTA CATACCTCTTGCTTTTCCTTCCACCTCACCTCATAGTTGGTATATGAAAGATTTGATTTTTTTTAGTTCTGAAAATTCTGCATGTACAATTAGGTTGATA TGATACTAGGATCATCATTAAGTACTACTCTAAACTTAATTTTCAGATATTCAATCAGGTTTTCTAATGAAATGAAGGTTTTTTCTTATTATGTTTATCA TTATTCAATCGATGCTCTTGTGTGTGGGCAGAGATCTATCAAATTAGTTATGTTTTATTTGTCTTGATGTCTTTGTTGGATCTGTCTGTGTGATCTGTGC TATGATGAATATCTGGGACAAAATTTATGTTTTTTTAAGTTGGATTCTGTTTCTTTATTTGTTTAAACCAAAAGTAGTAATTCTGTTTATAATTTTGACA TATTTTCGGCTTCTAATTCATATGACTTGGGAAGTGTTGTTTTCTCACATTATATATGTATGTATGTATGTATATACAAATAAATACACACACTTAATGA ATTCTAAGACATGAGCCAATTACTTGAACTTGACAATTGGATAGGAGAGTTATTTTGATCTCTTTTTACACTTGAAACTCTGAAGTTCTTATATGTGAAT TTTTATGATGCTGGTTGGTATTTACGAGCCAATTTTCAGACTCCATGAATCTTGGTTTTTGCAGTACCATTCATGTGAAATACTCTTACCTATTGATTTC ATTCTCTCTTTTTTCTTTTCATATCTATCATATTTCTCTAAGCTTCGTTTGAAGAGATATATATTGAAACAGTTCCACAATCTAGAGTGACTTTATCTGA TAAAAGTTATGCATGTCAAGTTCTTTGATTAATTTAACTACTAGATTATGTGACTTTAAAACAACTTCTAAAATGGGCTTCCTAGATAATTGGTTGATAT GAATATACCTGGTTCTCACATTTATAGGCTTAAGCTTATTGGATGCAAAGTTGCTAACTCTAAGAGGTATAATCTGTCTTCATATTAGACAGACAAAATG CTAGGAGGACTGCGAGTGTTTTTATCACACGGGAATGTCATAAAAAATGCTGTTTTGCAACAAGTCCGCATGGTGAACCCCCTATTGCAGCCAGTTGCCT TTTCACGTTTTGAGTCTGTTAAATCTGCTCGCATTGAGGAGCATGGTTTTGAGAGCACCACCATTGCAGACATTCTGAAAGGGAAAGGTAAAGGTGCAGA TGGCTCTTGGCTTTGGTGCACCACTGATGATACTGTTTATGATGCTGTTAAATCGATGACTCAGAACAATGTTGGAGCTTTGGTGGTTGTGAAACCTGGT GGTGAGCAGAAGTCTATTGCAGGAATTATAACAGAAAGAGGTAATTGATAGGGATGCAATTTTTTGGGGGTACTGTGATATGTTTTTTTATAGATGACCT AGTAATATGCCTGAGATATTGGTTTATGTCAGGGTTTTCTTTTTGAAAATATATTGGATTTTTCCATTAGGTGTAGTAGAATACTGGCTTAGTGACTATA TCGTATTGAAACTGATTTTGGATGTGTTGTTGGATCAGGAACATTAGAGAATGAATGGTATATGTAACTGTCACTGCCCAATGGCGCTGGGGAATAATTT TATGACCACTTTAATCTAAACAAAGTTTTTAAAAAGGTTTTCTTTGTGGATTTCATGAAATGAATTTCTGTCAGGAATTACAATTCGAGTTTACATTATC TTTATTGTGTCCCCTACACATCATTGCAAAATGCAAAGTGGTGAAGCTAACTTTCTATGTTACATAAGCAGGGGGGGCTACTTTTTTTATGCTTTGTCAA TGAACATGATTTATGATATAACATTATGGTGTCGTTCGAATCATGTAGTCGACCCGACCCAGTGGGACAAAGGCTTGGTTGTTGTTGTTAACTCTTCCTC ATCTCTTTGTACTATTGTTAACACCTAATACTAAAATTCCTTAAAAGTCTTAAGAGAAACACTTTTCTCATGAATAAGATCAACTGTATCATATAGTTTG CAAAATGAAAGCTGTCATGATTGCGATAGATTAAGGATGTGATGTTATTGGTGCACTTGGGCATTTCTGGAGGTGGACGTGCATATTGCGCTGTGAAGAC GCACATCTTCTTTGATAAGAACAAAGTGATAAGCAAATCCCCTGATTAGCTAAGGGTCCAGTTAATTACCTTGCATAATGTACGGGAGGAAAATTGTATT AGGTTGTTATACGGTCCAAATGTAAAGAGTATATATGCTGATTATATTTGTCAGTGTGTCATCTATGTACACTTTTTTTGTCATCTCGTTGTCCAGATTA TCTCAGGAAGATCATCGTCCAAGGAAGATCATCCAAGTCCACCAAGGTTGGGGATATTATGACTGAAGAGAACAAACTTATCACAGTCTCACCGGATACA AAAGTTCTGAGGGCAATGCAACTGATGACTGATAACAGAATCAGACACATCCCCGTCATCAATGACAAAGGGATGATTGGCATGGTGTCCATCGGGGATG TGGTTCGTGCTGTTGTGAGCGAGCACCGACAAGAGCTTGACCGCTTGAATGCTTATATACAGGGAGGTTACTAGATGATGATGATGTCGAAAATCTCTCA TGGAGCACTCTAGCTGAGTCGGAGTATGTAATAAGCTTGAGTGGTTGTAAATATGTTTTTGCAAACTCTTGTTTGCTTTTCTGTTAATTCCAGGTTTCAG TATTATGGACATTAACCCTTGACATAGTTCGTTAATAATGATTACTGCTGGGTGCTGTTTGAGTATCTGCTATGTTCTGTTCTGAACCTTGTTTCGCTAG GACTTGGATCTTTAACTTTCACAGTTTGCAAATGATTGGTTTTGTGCTGAAAGTTATGTTAGTAGTTGAAAATGTGGCTTTCTTTCTTTCTTTTTTACAA AAATGAAGCTTTTAAAAATAACTATATTAATTTGAAGAATTCATGCAAAAAATATATATGCATGCACGGG
• Tissue: pods
• Gene name: LI_gene_174452;
• Additional information: details;

Expression of Ll_transcript_533150

FPKM

• PAB: 5
• PNAB: 1.6
• PS1: 2.8
• PS2: 3.7
• PS3: 4.8
• PW1: 7.7
• PW2: 6.1
• PW3: 7.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_533150

• Blastp: CBS domain-containing protein CBSX3, mitochondrial from Arabidopsis with 70.43% of identity
• Blastx: CBS domain-containing protein CBSX3, mitochondrial from Arabidopsis with 93.48% of identity
• Eggnog: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517)
• Kegg: Link to kegg annotations (AT5G10860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461826.1)
• Pfam: CBS domain (PF00571.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;