Ll_transcript_532736

• Id Trinity: TRINITY_DN50074_c1_g1_i12
• Name Transcript: Ll_transcript_532736
• Sequence: CTAATTTTCATTTTTCTCTTACAATACAAATTATATACCTTCTCCTTTTCTCCCCTTCACTCTCAAGTTGTAACCCTTTTTTTTCAGACTTTTCCATGGA ATCTGAATTAGATCATGGATAAAAATGTCAACTTTTCATGATTTTTGTTCAAATCAATAAGTTCTCTGCATTTTTAGGCTCAACAGGTTAATGGGTTTTT CGTCCTTATTTTGGTAACAAATAGTATGGTATAGTTGTTTCCTTTAACTGTCTCTGTGTGTAGTTGATTTTAGTCTTCACTTTTTTGTTGTTCCTGAATG CTGTATTAGGAAAAAGGGTGTATGTAGCTTAGTTTTTGAAAGGGGTTAGTGATGGTGATGTTAGGGAATGACCCAGTTGAGTCTTTTTTCAATTCCATCA ATGGTATCAAAGAAGCTTTTTTACCATTGGAAGTGGGTATTAGGAAAGCAAAAAATGATTTTGAGCATTGCTGGTTAGGGACTATTAGGAATAAGGAAAA TGGGGTTCAGTTGATTGCACATGAGATTTGTGGTGTGAAGAATCAGAAGAAGAGTGGTGAGTGTGTGGTTGTTGGTGATAAGAGGAATAAAGGGTTGTCA GAGAAGGTAAATTTGAAGTCTTTTTTGGGTGTGTTTTCACAGAATGTAGAAAGTGGGAATAGTGGTGATGTGTTGAATGAGAAGGAGGAGGTGGTTATTG CTAAGGACGATGAATCATGTGTTAACTGCTTGAAGTTTTCGATAACTTGGTCTTTGATGGTTAATGGATTTCTTCAGGGCATGGCAGATCCTGTCAAACC TGGGAGAAAGAGGTTTCAGAAAATTGGTGATGAAGATAAGTTGTGTTCATGCATGAAGTCGAATGTTTCATGTGAAGTGAAGCAAAATGGATCTAAGGCT CAGTTTATTAGAACTATCGGGGACACGGGTGTGATGGAGAAGGAAGGAAAGCATGCTTCACTTGAGTGCCTTATAGGTTTTATCTTTGATCAATTTCCTC AGACTCCTCGGAGTCTTGATCAGGGAGTTCAAGAAAATGGCAATGACTTTGGGAAAAAATCTCAGGGGTCGCATCATTTTTTGTCTCATTTTAGTGACAT GAATCGACTTAAACATATTTTGGAAGGACACAAAGTATATGTGGATAGGTTCTTAGGGAATTTGAGGTTTGCAAAGATGGGTGGTGTGCCATCAAATGTG ATTGAAATAAGTCCTTCAACAAGCGAAGGGGGAGATAGTAGTGCTACTGTTGTAAACAGGAAAGACACCGGGGAAAGTTTCCCTCAGAAGTTTGCCACCA GCATACTCAGCGTTACGCTGTCCAACATGGCGCGTATAAGATCAAATCTTTCCACAGTTTCATTGACAGAGTTGGTTGAGATGATACCACAGCTGGGGCA AGTATCTACCGAGCATCCTGACAAGAAGAAACTATTCTCTGTACAAGATTTCTTCCGATACACAGAAACTGAAGGTAGGAGGTTCTTTGAGGAGCTCGAT AGAGATGGTGATGGCCAAGTTACTCTAGAAGATCTAGAAATTGCAATGACAAATAGAAAGCTGCCACGAAAATACGCTCATGAATTTATGAGACATACTA GAAGTCACTTATTTGCAAAGTCTTTTGGTTTGAACGATTCTTATCATTAATAGAACATAAGGAGCCAACAATTCTTCGCACATATACTTCACTATGTCTA AGCAAGTCTGGGATGCTGGAGAAGAGTGAAATATTGGAATCACTACAGAATGCAAGACTTCCTGCAAATGAAGATGATGCAGTTGCTATGATGCAATTTC TGAATGCAAATACTGAAGAATCTATTTCTTATGGACATTTCCGCAATTTCATGCTTCTGCTTCCCTCTGACCGTCTTCAAGAGGATCCTAGGTAGTATAA ATACACTCATTCAAATTTCTTTTTTGTTAGTGTGCACTATACTCTTGATCCATCACCACTTGTTTTCTACATTATGTTTGGATGGAGTAGTTTGGAGGGA GCGATAGGAATAGTTTTTCATTTCTTGGTTGTGTGAACTATGAAATGTTTATAAAAATGAACAAGGGGATGTTTAATTAAAGGAAAAGTTACCTTTC
• Tissue: pods
• Gene name: LI_gene_174504;
• Additional information: details;

Expression of Ll_transcript_532736

FPKM

• PAB: 0.4
• PNAB: 0.6
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.5
• PW2: 0.8
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_532736

• Blastp: -
• Blastx: Calcium-binding mitochondrial carrier protein SCaMC-1 from Oryctolagus with 26.88% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461504.1)
• Pfam: EF hand (PF13202.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;