Id Trinity | TRINITY_DN50074_c1_g1_i13 |
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Name Transcript | Ll_transcript_532737 |
Sequence | TGTTACTACTATTGTACATTGATGTTGTTGTTATTGTTGTTCCTCAGTCTCAACGCTAACTCTGTCCAATACAACCTCTTTATATATTTCCAATCTTATC CTATTTTCCCACTCTTTCCCACCAATCTTATTACACTAATCCCTCTCCCTTTTTTTCTGAACCCATTTCTGCATTTCCATCAACTCCTTCTTTCTTCAAA ATCTTTTCTTTTTCATTTCTGGGACCTTGTTACTTTATCTCTTGATTCTCTTCCAACCCCTTCTTAAGAATAATTTGATACACATTCTTTACATTTCAAC TTGTTTTGCACTTTCATGTGCTGTTATTTTAATAACTAAGTGCAAAAAGACTGTGACTTTTTCAAAGGGTTGACTAAAGATGGTGTCTACTAATGACCCT GTTGAGTCTTTCTTCAACTCCATTCAAGTTATGAAGGATTCTCTGTCTCCTCTTGAATTGGGTATTCGAAAGGCGGCAAAGGATCTTGAACATTGTTTCT TGCCAATGAACAAGGCTAAAGGTGTTTGTTTAATTGCCCAAGGTGGTGAATTTCAGATAAGTGATGTTGGTAAGAATAATAAGAAGAAGAATAATAATGG GTTGTGTTTTGTTGGTGCTGCTGATGAGAGGAAAAAAAGTTTGTCAATTAAGGTTCCTTTGAAGGCTTTCTTGGGCATGTTATCACAAATTTCAGGGAAT GGAAATAGGACTCAAGTTTCCAAGGAAAATGGACCTTGTTGCACCAATTGTTTTCAGTTTGCTGTGACTTGGTCTTTGCTGGTTAATGGTTTTCTTCAGG CTATTCCACTTCCTTTCAAATCTGGGAGGAGGAAGTTTCAGAATAGTGGCGATCAAGATACGTTCTTTTCTTGCATGAAACCTAATATTTCATCATGTGA AGTGAAACAGAGTGAAAGGAAAGTAAGGGAAAATGGTGTGTGGAAGAAGGACGGAGAGCATGTTTCACTTGAATGCCTTGTTGGTCTTATCTTTGATCAG TTGTTTCACACTCTTCAGAGCATTGATCATAGAGTGCAAGAAAATGATATTGACACTGAGAAAACTACTATGCCCAATTCTCATTTTGGTCATGTGAATG CGTTCCCAAGTTTCTTGGAAGGGCACAAAGTAGATGTGAATGGATTCTTTGGGAATTTAAATTTTGCAAAGGTGGGTGGTGTACCATCAAGTGTACTTGG AGTAGAATACCCTCCGTCAAAAGACAAGGAAGAAACTGGAGTAAGTTTGCGCCAGGAGGTTGCTAATAACATATTCACCATTCCTCTATCAAATGTGGAG CGTCTAAAGTCTACACTTTCTTCTGTTTCATTCGCAGAATTGGTTGAGCTGGTACCTCAATTGGTTAGGAGAACATCTAAAGACCATCCTGATAAGAAGA AACTATTTTCTGTACAAGATTTCTTTAGATACACTGAGGCTGAAGGGAGGAGGTTCTTTGAGGAACTAGATAGAGATTGTGATGGCCAAGTAACTCTGGA TGATCTAGAAATTGCAATGAGAAGGAGAAAGCTTCCACGAAGATATGCTAAAGAATTTATGAGCCGTGCTAGAAGTCACATATTTTCTAGGTCCTTTAGT TGGAAACAGTTCTTATCATTGGTGGAACAGAAGGAGCCAACAATTCTTCGTGCATATACTTCTCTGTGTCTAAGTAAGTCAGGGACACTCACGAAGAGTG AAATATTGGAATCGCTAAATAATGCAGGACTCCCTGCAAATGATGACAATGCAGTTGCTATGATGCGATTTCTAGATGCAGACACAGAAGAATCTATTTC GTATGGACATTTTCGCAATTTTATGCTTTTGCTTCCTTCTGATCGTCTTCAAGAGGATCCTAGGAGTATTTGGTTTGAAGCTGCGACTGTGGTTTCCGTT CCACCACCTGTTGAAATTCCTGCTGGAAGTGTTCTACGATCTGCATTGGCAGGTGGCCTTTCTTCTGCTTTGTCCTGTGCTTTACTGCATCCAGTTGATT CAATCAAGACTCGAGTACAAGCATCAGCCACGTCCTTCCCTGAAATCATTGCCCAGCTGCCACAGATTGGAGCACGTGGTTTATACAGGGGATCAATCCC TGCAATTCTTGGACAGTTTTCGAGCCATGGCCTGCGGACTGGGATATTTGAGGCGAGTAAATTAGTGTTGATAAACTTTGCTCCAACACTACCAGAACTC CAGGTACAATCTATAGCATCATTTTGTAGCACATTTTTGGGAACAGCTGTGCGGATCCCCTGTGAGGTGTTAAAGCAACGGTTGCAGGCTGGTCTTTTTG ACAATGCGGGTGAGGCTTTAGTTGCAACTTGGAAGCAGGATGGTCTTAGGGGTTTCTTTCGTGGAACTGGAGCTACCCTTTGTCGCGAGGTTCCATTTTA TGTTGCTGGCATGGGGCTTTATGCTGAATCGAAAAAGGGCAGGATTATAAATAGAATCATGGCTGTTCCACATTGAGATGGTATTGTATCATGACTGCTA TTGTATATTTTGGATACTGAGCGGTCTTGGCATTTTGATTTTAGGGCGTCCAAAAACTACTAGGAAGGGAACTGGAAGTGTGGGAAACACTTGCAGTTGG AGCTTTATCCGGTGGCTTGGCTGCTGTTATCACAACACCGTTCGATGTGATGAAAACTAGAATGATGACTGCACAGGGTCGATCTGTGTCGATGACTGTA ATAGTCATTTCTATACTCCGGCATGAGGGACCCCTTGGCTTGTTTAAAGGAGCAATACCCAGATTCTTTTGGATTGCTCCTCTAGGTGCCATGAACTTTG CAGGTTATGAGTTAGCTAAGAAGGCTATGAATAAAAATAATGAGCAAGTTGGTAAGGGAGGCACTTCAGAATAATGTATAGCTGCAACAACAAAACTGTC ATATGGAAATTGAGCCCCTTTTGAGTATAGTGCAGTTCATTTGTAGCAGCAGATTTTTTTAAAAGAAAATCAACTTGTAGGGCACTTAAAAACTAAAAAA GTTCCATTGATCTTTGAGTTTTTCAGATTTTAGGCACTCTTTTGACAAGTGTATAGTTCTTGAGGTTGAAACTATAGTTTAGAGTAGCCTACTTCTGAAT GAGTATATGAAATAAATTATGATTGGACCCACCTGAAATTTCTGATGTTCACATTGACACTTGTTTTTTTTTACATGCAAGTCTTTATTCTTTTTGTAAT TTCACTTTTGTAGAGACTTGCGTGGGATTAAGATTGGTAATGTAGTTATATTTTCATGT BLAST |
Tissue | pods |
Gene name | LI_gene_174504; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_532737
Blastp | Calcium-binding mitochondrial carrier protein SCaMC-1-A from Xenopus with 23.45% of identity |
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Blastx | Calcium-binding mitochondrial carrier protein SCaMC-1-A from Xenopus with 23.45% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (398474) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441945.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |