| Id Trinity | TRINITY_DN50100_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_279619 |
| Sequence | CTGAACGGTAATGTTCCTACCACTCGCTAAAGATGTGTGATTAGACACTCACTCACTCTTATTTTTATTTTTATTCAAATATGTCCAAATTGAACAGATA AAGAAGCCTTTTAATGTAATACACATATATATAGAAACATTATCAGTCACACCCTTCTAGTTTATGCCTTCATTCTCAACAACTCCATACAAGGAACATA ACTAACTATAAAATGAGGGGTGGTTTGTGGTAACTTGGGCAGTCAATCACCCGCCGTCTAGCCAACGGTGAAAAGAAGGCTGTTGTTCGCCGATATTTTT CCGTAGCAGCTGAGCTGAAGAAGATTGTTCTTTATGACTTCCATGTTGCTCATGGTGGGAAGATGGTGCCATTTGCCGGATGGAGCATGCCAATTCAATA CAAGGACTCAATTATGGACTCAACCCTAAACTGTAAGGAAATGGTAGTCTTTTTGATGTTTCACATATGTGTGGGCTAAGCCTCAAGGGAAAAGACAGTG TTCCGTTCCTTGAAAAGCTTGTCGCTGCTGATGTTGCTGGGCTTGCCCCCGGAACTGGATCACTAACTGTCTTCACAAATGAAAAGGGAGGGGCGATTGA TGATTCAGTGATTACCAAGGTGACGGATAATCACATATACTTGGTTGTGAATACTGGCTGCAGGGATAAAGATCTGGCTCATATTGAGGAGCATATGAAG GCATTCAAGGCCAAAGGTGGCGATGTGTCGTGGCACATCCATGATGAGAGATCCCTTCTTGCCCTGCAGGGTCCTCTTGCTGCTCCTGTTCTTCAACACC TGACAAAAGGGGATTTGAGCAAGCTGTATTTTGGGCAGTTCTGTGTGTTGGACATCAATGGCTCGCAGTGCTTTCTTACGCGAACCGGGTATGTTTTCTT TTTCTAACATTAGCGACTTACCCTGCAATGTCCTTCTTAGTTGTAGTAATGCTATCTGAATTCCATCTTATGTTACATGCTATATCGATGTTAAATCTTT CCTTTCCTTCTCACAATGCAATAATTTCCTAATTCATGAAATGAGTGCAATTTGATAAATTCAGTTAGTCCTTTTGTGTTGTTAGCTAAATCAGAGTTTA TCAGTGACAAAATGCTTAATCGCAATGGTAGTACTATGCACAATAATGCAGTCTTTGCCGAGACTTTCAGGTATACTGGCGAAGACGGATTTGAGATCTC AGTTCCTTCTGAGAATGCAGTTGATCTTGCCAAGGCAATCCTTGAAAAATCTGAAGGGGAGATAAGATTGACAGGGTTGGGTGCTCGAGATAGTCTTCGA CTAGAAGCTGGATTGTGTTTATATGGTAATGACATGGAACAACACATTACACCTATTGAGGCAGGACTGACATGGGCCATAGGGAAGAGAAGGAGAGCAG AAAGTGGTTTTCTTGGAGCTTAAGTTATACTGAAACAGCTTGAAGAAGGTCCTAAGATCCAGCGTGTTGGTTTCTTTTCGTCTGGACCACTTCCTAGAAG CCACAGCGAGATTCAAGATGAAGGCGGCAACAACATCGGGGAAGTCACCAGCGGCGGATTCAGCCCTTGCCTTAAGAAGAACATTGCCATGAGATATGTG AAATCAGGATTGCACAAGGCAGGCACTAAAGTAAAGATTATTATTGGTGGAAAAGCCAATGAAGGAGTTGTTACAAAGGTGCCATTTGTACCAACAAAGT ACTATAAGCCTTGAACATTTCCCTATTGCTCCCCCTTGACCAGTTTTCCTATAATATGAATGATGTAATATTTTCTTAATGCCATTGTCATACTAACATC AAGTACAAGGAGAATGCCTTGCATTAATAACTCATATTTTCATTTCAAACATGTATGATAGTTGAGTTCACGAGGGTGAGTTTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174688; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279619
| Blastp | Aminomethyltransferase, mitochondrial from Arabidopsis with 91.61% of identity |
|---|---|
| Blastx | Aminomethyltransferase, mitochondrial from Pisum with 80.48% of identity |
| Eggnog | The glycine cleavage system catalyzes the degradation of glycine (By similarity)(COG0404) |
| Kegg | Link to kegg annotations (AT1G11860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419681.1) |
| Pfam | Aminomethyltransferase folate-binding domain (PF01571.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |