Ll_transcript_279604

• Id Trinity: TRINITY_DN50100_c0_g1_i2
• Name Transcript: Ll_transcript_279604
• Sequence: AAATAATCTATCATCCTATTTTAATACCTTTTTGGTCTTCCATTCTTAACATCTTCAGAGTTCAGACTCAGAACAAACCCAAAAATATAACAGAAAATGA GGGGTGGCTTGTGGCAACTTGGGCAATCAATCACCCGCCGTCTTGCCAACGGTGACAAGAAGGCTGCTGCTCGTCGATATTTCGCTACAGAAGCTGAGCT GAAAAAGACAGCTCTTTATGACTTCCATGTTGCTAATGGTGGGAAGATGGTGCCATTTGCCGGATGGAGCATGCCAATTCAATACAAGGACTCAATCATG GACTCGACCCTAAACTGTAGGGAGAATGGTAGCCTTTTCGATGTTTCTCATATGTGTGGGCTAAGCCTCAAGGGGAAAGACAGTGTCCCATTCCTTGAAA AGCTTGTCATTGCTGATGTTGCCGCACTTGCCCCCGGAACTGGATCCTTAACTGTGTTCACAAATGAAAAGGGAGGGGCAATTGATGATTCAGTGATCAC CAAGGTTACAGATCATCACATATACTTGGTTGTGAATGCTGGGTGCAGGGATAAAGATCTGGCTCATATTGAGGAGCATATGAAGTCGTTCAAGGCCAAA GGCGGTGATGTTTCGTGGCACATCCATGATGAGAGATCTCTACTTGCTCTGCAGGTCACATATCACACTCTTCTACATTTGCATCACACATTTTGAAGCA AGCTTATAGCTTTTGTGGTTTTCTTTTAGTTGTTATGATCTCTAAATAACGGCGAGCGTTAAGATGGATTTAGTGTGCTCTACGGATTAAAATAATGTAA TCCGTAATCTTAGATGTTTGTGCCATATTGCTTGTTTTAGTTCATGGTAAAAAAAACTTTGAACTTTGTTTGGTGAGGTCACTAAAAGATTATTATTAAC TTTTTGAGGTGATTAGGTTGAATCTGACTACCAAATTGAAGGACTTTTAAACTAATGAACTGTTCTTTTTCCTTGCAGGGTCCTCTAGCTGCTCCTGTTC TTCAGCATCTGACAAAAGAGGATTTGAGCAAGCTGTACTTTGGCGAATTCCGTGTGTTGGACATCAACGGCTCGCAGTGCTTTCTCACACGGACAGGGTA TGTTTTGTCGTGGTTTTATTTCTCTTATATTAGTGATTTGCCCTGTAAAGTTTGTATGGGTTGTAACTGTGCTGTCTGAAATTTCATCATGTGTTGCTTT TGCTATATCAGATTTAAAATCCTCCCTTGCCTTCTAAAAATGCAATAATTTCCTAACTCATAACAAGTGCAATTTGATAAATTCAGTTGGTCTTTTTCTG TTGTTAGCTAAATCAGAGTTTATCAGTGATGCTATGCTTAATCCCAATGATTGTTTTATGCATAATAAGACACTCTTTACCGAGACTTTCAGGTATACCG GTGAAGATGGATTCGAGATCTCAGTTCCTTCAGAGAATGCACTGGATCTCGCCAAGGCAATTCTGGAAAAATCTGAAGGGAAGATAAGATTGACAGGATT GGGTGCTCGAGATAGTCTTCGACTCGAAGCTGGATTGTGTTTATATGGCAATGACATGGAACAGCACATTACCCCTATTGAGGCAGGGCTAACATGGGCC ATTGGGAAGAGAAGGAGAGCAGAAGGTGGTTTTCTGGGAGCAGAGTTTATACTGAAACAACTTGAAGAAGGTCCTAAGATCCGGCGTGTCGGTTTCTTTT CTTCTGGCCCACCTCCTAGAAGCCACAGTGAGATTCAAGATGAAGGAGGCAACAACATCGGGGAAGTCACTAGTGGCGGATTCAGCCCTTGTCTCAAGAA GAACATAGCTATGGGGTACGTGAAATCGGGATTGCACAAGGCAGGCACGAAAGTGAAGATTATTATTCGAGGAAAAGCCAATGAAGGAGTTGTTACAAAA ATGCCATTTGTGCCAACAAAGTATTATAAGCCTTGAAAGTTTTCCAATTGCTCCTCCCTCTTGACCAGTTTTCTCATAATCTGAAAGCTGTAATCAATTT CTATTGCCATTGTTCTACTGACATTAAGTACAAGGAGAATGCCTTGCATTAATAACTCATATTTTCATTCAAAACATCTATGATAGTTGATTTCATAATG TTATCTTGAAATTTTCTTACACTGTTCTTACCAACTTCTACTACAGTAGAGTCTGCATGTCATCCG
• Tissue: pods
• Gene name: LI_gene_174688;
• Additional information: details;

Expression of Ll_transcript_279604

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.1
• PS3: 0.5
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279604

• Blastp: Aminomethyltransferase, mitochondrial from Solanum with 89.78% of identity
• Blastx: Aminomethyltransferase, mitochondrial from Solanum with 89.78% of identity
• Eggnog: The glycine cleavage system catalyzes the degradation of glycine (By similarity)(COG0404)
• Kegg: Link to kegg annotations (102602939)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426057.1)
• Pfam: Aminomethyltransferase folate-binding domain (PF01571.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;