Ll_transcript_279611

• Id Trinity: TRINITY_DN50100_c0_g1_i9
• Name Transcript: Ll_transcript_279611
• Sequence: CAAAATATGAAATACTATGTGATTTTATCCAACCAAGCTTCAATTTGAAGTGACAAAAAGCATAGCATAAAGAAGAAACAATTGAAGATGTAGTCCATAA CATAAGATAGAGTTGAATTGAAGAGGTCCACTCACAAATGATCTCAACTTTCTCACTCCTATTTTTATAACATTTATTTTAATATTCCAAATTCAACAGA TAAATAGGCCTTTTATTATCATACACATATATATATACATATATATATGTGTATATTCATTCTGAACAACAATTCCACATACAGAACAAACCCAACTATA TAACAGAAAATGAGGGGTGGTTTGTGGCAACTTGGGCAATCAATCACCCGCCGTCTTGCCAATGGTGATAAGAAGGCTGCTGCTCGTCGATATTTTTCCG CAGAAGCTGAGCTGAAGAAGACAGTTCTTTATGACTTCCATGTTGCTCATGGTGGTAAGATGGTGCCATTTGCTGGATGGAGCATGCCAATTCAATACAA GGACTCTATCATGGACTCGACCCTGAATTGTAGGGAGAATGGTAGCCTTTTTGATGTTTCACATATGTGTGGGCTAAGCCTCAAGGGGAAAGACAGTGTC GCGTTCCTTGAAAAGCTTGTCATTGCTGATGTTGCTGGGCTTGCTCCCGGAACTGGATCGTTAACTGTCTTCACAAATGAAAAGGGAGGGGCGATTGATG ATTCAGTGATTACCAAGGTGTCGGATGATCACATATACTTGGTTGTGAATGCTGGGTGTAGGGATAAAGATCTGGCTCATATTGAGGAGCATATGAAGGC ATTCAAGGCCAAAGGCGGTGATGTATCGTGGCACATCCATGATGAGAGATCTCTTCTTGCTCTGCAGGTCATTTGTCACACACTTCTACATTTGCATCAC ACACACTTTGAACTTTGAAGTGACTTGTAGCTTTTGATGTTTTCTTCTTCTTTCATTTCCCTTTTTGATGTGTCTGTATTTTAGATGTTAAGCTCTCGAA ATAATGTGTATTGGGATGGCCATAATGTGCTCTAAAGATTAAAAGAATGCTTATGAGATAATTTAGCCGATTATCACGTGCCCGATATATATTTGGGTGT AGTGTGATTGTATAGAGTAATTGAAAATATGTTTGTGGCAGGGTCCCCTAGCTGCTCCAGTTCTTCAACACCTGACAAAAGAGGACTTGAGCAAGCTATA CTTTGGCGAGTTCCGTGTGTTGGACATCAATGGCTCGCAGTGCTTTCTCACACGGACAGGATATACTGGTGAAGATGGATTTGAGATCTCAGTTGCTTCA GAAAATGCACTGGATCTTGCCAAGGCACTTCTGGAAAAATCCGAAGGGAAGATAAGATTGACAGGATTGGGTGCTCGAGATAGTCTTCGACTCGAAGCTG GATTGTGTTTATATGGCAATGACATGGAACAACACATTACACCTATTGAGGCAGGACTGACATGGGCCATAGGGAAGAGAAGGAGAGCAGAAGGTGGTTT TCTAGGAGCTGAAGTTATACTGAAACAGCTTGCAGATGGTCCTACAATCCGGCGTGTCGGATTCTTTTCATCGGGCCCACCTCCTAGAAGCCACAGTGAG ATTCAAGATGAAGGTGGCAACATCATTGGAGAAGTGACCAGTGGTGGATTCAGCCCTTGTCTGAAGAAGAACATAGCCATGGGATATGTGAAATCAGGAT TGCACAAAGCTGGCACCAAAGTAAAGATTATTATTAGAGGAAAAGCCAATGAAGGAGTTGTTACAAAAATGCCATTTGTGCCAACAAAGTATTATAAGCC TTGAACATTTCTCAATTGCTCCCTCTAGACCATTTTTCCTATCATCTCAATGCTGTAATCAAGTACAAGGAGAATGCATTGCATTAATAACTCATATTTT CATTTCAAACATGTATGATAGTTGAGTTCATCATTATGTTGTCTTCAAATTTTCTCACATAGCAAATCCAGCTTATCACTCACAATATCCATAACATGAA TTTGGGATTCATCACCAATGTAAACATTCCAACCTTACAAGTTACAACAAATAAGATCATCTTAAGCCTGCAGGG
• Tissue: pods
• Gene name: LI_gene_174688;
• Additional information: details;

Expression of Ll_transcript_279611

FPKM

• PAB: 1.2
• PNAB: 0.7
• PS1: 0.5
• PS2: 0.1
• PS3: 0.3
• PW1: 1
• PW2: 1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279611

• Blastp: Aminomethyltransferase, mitochondrial from Flaveria with 88.32% of identity
• Blastx: Aminomethyltransferase, mitochondrial from Pisum with 94.57% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439837.1)
• Pfam: Aminomethyltransferase folate-binding domain (PF01571.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;