| Id Trinity | TRINITY_DN50105_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_280292 |
| Sequence | CTTATCTATCTATCTATCCCCTTTCTCTCTCTTTCTGTTTCTGTTTCTGCTTCTTCAAATGACCATGACCATGGCTACTATTACTACTACTATTACTTCT TCATCGTCATCCCTGATGTTCACCCATCTTCAACATTCATCTCTCCTTCTCAATTCCATGCATCTCAATTTCCGCAGGGGACCCAGCAGGCCTTTCCAGC CCCTCGTGGCTGCTCTGGAAGTTGCTGAAGCTGTTGAACAGGATGTTGAAGAGGAAAGCATTATGATGAAGCCCAAGAAAGGGAAGGCCGCATTGGCTCT CAAGAGGGATAGGCTGAGGTCTAAGAGGTTCCTTGAAATTCAGAATTTGAGGGAGCATAACAAAGAATATGACTTGAACACAGCAATAGGTTTGCTTAAA GAAACAGCCAAAACCAAGTTTGTAGAAACTGTAGAAGCCCATTTCCGCCTCAACATTGACCCTAAGTACAATGACCAACAGTTAAGGGCAACCGTGAGTC TGCCAAAGGGAACTGGAAAGCCTGTTAAAGTGGCTGTTCTTACCCAAGGTGAAAGATTCGATGAAGCAAAAAATGCGGGAGCTGATTTGGTCGGTGGAGA GGACCTCATAGAACAGATTAAAGGAGGTTTCATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTGTTCTTCTCATTATCTGCTTCT AATTACTGTTTAGGCTTTCTTGCATTTAAAGTTCAGCTTTCTTTTCAGTATAATTAAAGTATCCAGAAAATGATGTATATCAATAAATGGGCCAAAAGAA TTTGGTGATTGGCTGAATTATTTGCAAATCAGTTTCCCCTAATGTAAATTAGAAATCACATTTTTAGTGGTTGTCAAATCTATTTCTAATTAGGCTGGAA ACTCCTATGTTTATTTTTTGCTTTCAATATGTTTGCATTTAATGCATGCTTAATCTGTGCTGGCATAAAATGTCACCATTGGTTTTCTTCATTAGCTAAA CTGCTAATCATCTTTCATATGTAAAAATTACAATTAGATGGCTTCATATGAGATTCTGCTCATCGGTTACTGCTTGACATTTCAAACAAATTTTGGTAAG ATGCATTTGTTCTCTTTACATGACATTTTAATAAAATGATAAGTCAATTGTGGTAGCATGCTGTAAGGCACTTTCTTATTCTTAGATGCTCGTATGGATA AGGCCTTTCAATATATTGGCTGATAGTATGCAAGTATGAAAAGTTCCTTAATTGTCATTGTTGATTGTGTCAGGTTGCTAGCCTTGGAAAGATTCTGGGG CCAAGAGGACTGATGCCAAATCCAAAAGCTGGCACTGTCACACCTAATATTCCTCAGGCTATAGCAGAATTCAAACAGGGAAAAGTTGAATTCCGGGCAG ACAAAACCGGAATTGTGCACTTACCTTTTGGAAAAGCTGATTTTCCAGAAGAGGATCTTCTTGTAAACTTGGTTGCTGCAATAAGATCAGTAGAGGCCAA CAAACCATCAGGCGCGAAAGGTGTGTACTGGAAAAGCGCTCACATATGCTCAGCGATGGGGCCTTCGATTAAGTTAAACATCAGGGAGATGCTTGATTAC AAATTTCCATCAGAATAGAACACATGTAAATGCAATGCTTGTTTTGATTTAGCCAGCTTTATGGGGGATAGACTTTGGTGGTTATAAGTTATATATCTTT GTTAAATATCTGCACCTAAAATATGCACACTGCATAGTCTGACTCCAGCCAGAGGATTTTATTTACCTTGTACCACTTTGTAACTAACACTGGAGATTTA TTACATTTTCTTTCCTGGTAATAAACTTTGGTTTTTACATTTGATGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_174732; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280292
| Blastp | 50S ribosomal protein L1, chloroplastic from Pisum with 88.89% of identity |
|---|---|
| Blastx | 50S ribosomal protein L1, chloroplastic from Pisum with 94.02% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000332) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454375.1) |
| Pfam | Ribosomal protein L1p/L10e family (PF00687.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |