| Id Trinity | TRINITY_DN50105_c5_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_280307 |
| Sequence | CTCTAAGCCTAAGAAGGGGAAGGTTGCTTTGCCTCTCAAGAGGGACATGCTTCGGTCTAAGAGATTCTTGCAAATTCAAAACACGAGGGAGCATAAGAAA GAGTATGACTTGAAGACAGCAATATCATTGGTTAAGGAGACAGCTAAAACAAAGTTTGTAGAAACAGTGGAAGCACATTTCCGCCTCAACATTGACCCTA AGTACAATGACCAACAGTTAAGGGCAACCGTGAGTCTGCCAAAGGGAACTGGAAAGCCTGTTAAAGTGGCTGTTCTTACCCAAGGTGCTTATGTTTCTCA ATTCTTATTCTCCTTCCATTTACAATGCAGCCATACCCCGCCCAACCAACCAATTTAATACTTCCACTTTAATAATATATGTCTCCTTGCTTTGGCTATT ATATTTTAAACTTCATTTTCATAGGTGAAAGATTCGATGAAGCAAAAAATGCGGGAGCTGATTTGGTCGGTGGAGAGGACCTCATAGAACAGATTAAAGG AGGTTTCATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTGTTCTTCTCATTATCTGCTTCTAATTACTGTTTAGGCTTTCTTGCA TTTAAAGTTCAGCTTTCTTTTCAGTATAATTAAAGTATCCAGAAAATGATGTATATCAATAAATGGGCCAAAAGAATTTGGTGATTGGCTGAATTATTTG CAAATCAGTTTCCCCTAATGTAAATTAGAAATCACATTTTTAGTGGTTGTCAAATCTATTTCTAATTAGGCTGGAAACTCCTATGTTTATTTTTTGCTTT CAATATGTTTGCATTTAATGCATGCTTAATCTGTGCTGGCATAAAATGTCACCATTGGTTTTCTTCATTAGCTAAACTGCTAATCATCTTTCATATGTAA AAATTACAATTAGATGGCTTCATATGAGATTCTGCTCATCGGTTACTGCTTGACATTTCAAACAAATTTTGGTAAGATGCATTTGTTCTCTTTACATGAC ATTTTAATAAAATGATAAGTCAATTGTGGTAGCATGCTGTAAGGCACTTTCTTATTCTTAGATGCTCGTATGGATAAGGCCTTTCAATATATTGGCTGAT AGTATGCAAGTATGAAAAGTTCCTTAATTGTCATTGTTGATTGTGTCAGGTTGCTAGCCTTGGAAAGATTCTGGGGCCAAGAGGACTGATGCCAAATCCA AAAGCTGGCACTGTCACACCTAATATTCCTCAGGCTATAGCAGAATTCAAACAGGGAAAAGTTGAATTCCGGGCAGACAAAACCGGAATTGTGCACTTAC CTTTTGGAAAAGCTGATTTTCCAGAAGAGGATCTTCTTGTCAACTTGGTTGCTGCAATAAGATCAGTAGAGGCAAACAAACCGCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_174732; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280307
| Blastp | 50S ribosomal protein L1, chloroplastic from Pisum with 84.78% of identity |
|---|---|
| Blastx | 50S ribosomal protein L1, chloroplastic from Pisum with 84.78% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000332) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454375.1) |
| Pfam | Ribosomal protein L1p/L10e family (PF00687.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |