Ll_transcript_279810

• Id Trinity: TRINITY_DN50113_c3_g1_i14
• Name Transcript: Ll_transcript_279810
• Sequence: CTTCTTTAGAATTTTGTGTGGTCACAGATTTTGAAGAACCACACAGAACTAGTTCAAAAGAAAGAAACAAAATAGAATCCTACAGTTTCAGTAAACATGA AAGGGTTAGGTTCTCATACACCATTGGTTTCAAGGGGAAAGCTTCCTCTGTTGGCAGTGGTGGACATTTTACCATGCTGCCCTTATTTCTCTAGACTCAC CCTTTTATCCACATGCAAGTTCTATGGATAGTTATGCTTTTTTCTTACTCAAGTTGTAATTTTTTCATATGGGTTTGACTTTAAATTGAAAATTTTTCAT TCTGGGACTTATGCTTTTATCCTTTAAATTTGAAGGGCACATAGGCTTTTGTACTGTTTTACTAAAAGCTAGTTGGATTTGAAGATGTATGCAATTTGTG TTGGAAGAATGAGTGGTTACAATCATTTGGCTTAAGATGAGATTGAGAAATATCCCAAGTTATCAACAATCTCAGCATTATTTATTTCCTATCCATAACA ATCTTAACATTATATGTTCAATTTTGTTGATATATACGCACTCTCGGTGTAAATATTTATACACAGTCAGTTCATTATTCAACATTCATTTGTATTACTT TTTTAGGAGTCGAGAATGATTAAATATAAATGTTAGATAATGGAGTAACAATGTCTAAAACTCTCACGCCATCGGTGCATACAATTTTTTTCCCTCTTAC TTGCCAGCATTCTGTTCAGATGGATATCCAATTGAGGTGGGTAATGGGTTAAATCCAAAATCGACCCAATTGGGTGGTTCGCGGTTGATAAGAAAATGAT GTTGCTTGAAGTAACTTAATTGTGGTAACATCTTTATGAATGCGTGCAATACTTATTAATTTATCTGTTGTAGTATTTTGTTATCCTCTTGTTTGCTGAG TAGCAGGTTCACTTTTTTCTTTTTGGCATAATTGCTTAGTCTAAGTATCGTGCTAATCGTATTTTGCTGTTGATAGTTATCATGGACATCTGAATCAAAA TCTTATCTATGGATTGTTTTATGATCTACCTATTTTGTGCCATGGTTACCTTTGTATAACTTATAGTATTGGTACCTGTATTTGTTGTGTTACTGATTTA CATTCTGCCTAAATCTTATATAGTAAGATGCAGACAGAAATCGAGGTTGAGCTTGGCCAATGGCACAATCCGACCCCGAGCATCCAATGTTAGCGTTGGA CCTGGAGACTATGGAAGCAATAATGAAAAAAACAGCCAGAATGCCATCGAAGGAACTCCAGTGAATGACAGTTCATCTAAAATTGTGGAACCTCCCAATA GGATCCCTTATCCTATTTCTATAGCTCTTGTGCTGTTTGGATGTGCGCTTGTGTTTTCACTGATAGCCTTCTTGAAAGGAGGACCTTCAACAGTTCTGGC AGCAATTGCTAAATCAGGATTTACTGCTGCTTTTACATTGATATTTGTTTCTGAGATTGGGGACAAGACGTTCTTTATTGCTGCACTCTTGGCAATGCAA TATAAGAAGGGGTTGGTTCTATTGGGGTCAATGGGTGCTCTTGCACTCATGTCAGTCATGTCAGTTGTTATTGGCCGGATCTTTCAATCAGTGCCTGCTC AGTTCCAGACAACCTTGCCAATTGGAGAATATGCAGCCGTAACTCTTCTTTTGTTTTTCGGCTTAAAATCAATAAAAGACGCATGGGATCTTCCATCAGA TGTGGTTAATGATGGTAATGAAAACAGCCCTGAACTTGATGAACTCGCTGAAGCAGAAGTGCTCGTAAAAGAAAAGGCGTCAAAACGGCTTACAAATCCA CTGGAAATTATTTGGAAATCATTCAGCCTTATATTTTTTGCTGTAAGGCTGGCTCCTTTCCTCATATCCTTATACTCTGCAACATATTTTAATGGATTCA ATACATTGCTGTACTCTTAACTTTGTTGAATTTGCTCAATACCTCCCCACCGATCGCCGTAAATGTAGATACCATCAATTTACTACTAGTACTATTGATC TGTTTTTAAGTTAGAATGCTCAGTCTCTGAATAATTATTTCCCACCTGAACTTTACAAGTCAATGTTGTTAGTGGTGATTATTCAAAACCTCATACATAA TTAGTTATTTATGTGCTCCGGCATGAACTTTAATTTAGTAACTGTACTTGCCTAGGAATGGGGAGATCGGTCAATGCTTGCGACAATTGCACTTGGAGCT GCTCAGTCTCCTTGGGGTGTGGCAAGTGGAGCCATTGCTGGACACTTTCTTGCAACATGTATTGCCATTCTTGGAGGAGCAATCCTCGCTAACTACATTT CTGAAAAACTGGTTGGCTACTTGGGTGGAGGACTATTTCTAATATTTGCTTTTGCCACATTCTTTGGAGTTTTCTGATTTATTGCTGCATAATCCTACTC CTGTTTAAATTCAATAGCATATCACTGATGGAGATACGAGGAAGAACATGTCGAAAATGAAGAATGAATTGATGAAAACTTATAGTTCAACTTGGTTGAC AATTTCATTAGGTAGACAATAGGGG
• Tissue: pods
• Gene name: LI_gene_174777;
• Additional information: details;

Expression of Ll_transcript_279810

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.2
• PS3: 0.1
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279810

• Blastp: Protein PAM71-homolog, chloroplastic from Arabidopsis with 76.72% of identity
• Blastx: Protein PAM71-homolog, chloroplastic from Arabidopsis with 67.63% of identity
• Eggnog: transmembrane protein 165(COG2119)
• Kegg: Link to kegg annotations (AT4G13590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413169.1)
• Pfam: Uncharacterized protein family UPF0016 (PF01169.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;