Ll_transcript_279817

• Id Trinity: TRINITY_DN50113_c3_g1_i19
• Name Transcript: Ll_transcript_279817
• Sequence: CTTCTTTAGAATTTTGTGTGGTCACAGATTTTGAAGAACCACACAGAACTAGTTCAAAAGAAAGAAACAAAATAGAATCCTACAGTTTCAGTAAACATGA AAGGGTTAGGTTCTCATACACCATTGGTTTCAAGGGGAAAGCTTCCTCTGTTGGCAGTGGTGGACATTTTACCATGCTGCCCTTATTTCTCTAGACTCAC CCTTTTATCCACATTAAGATGCAGACAGAAATCGAGGTTGAGCTTGGCCAATGGCACAATCCGACCCCGAGCATCCAATGTTAGCGTTGGACCTGGAGAC TATGGAAGCAATAATGAAAAAAACAGCCAGAATGCCATCGAAGGAACTCCAGTGAATGACAGTTCATCTAAAATTGTGGAACCTCCCAATAGGATCCCTT ATCCTATTTCTATAGCTCTTGTGCTGTTTGGATGTGCGCTTGTGTTTTCACTGATAGCCTTCTTGAAAGGAGGACCTTCAACAGTTCTGGCAGCAATTGC TAAATCAGGATTTACTGCTGCTTTTACATTGATATTTGTTTCTGAGATTGGGGACAAGACGTTCTTTATTGCTGCACTCTTGGCAATGCAATATAAGAAG GGGTTGGTTCTATTGGGGTCAATGGGTGCTCTTGCACTCATGTCAGTCATGTCAGTTGTTATTGGCCGGATCTTTCAATCAGTGCCTGCTCAGTTCCAGA CAACCTTGCCAATTGGAGAATATGCAGCCGTAACTCTTCTTTTGTTTTTCGGCTTAAAATCAATAAAAGACGCATGGGATCTTCCATCAGATGTGGTTAA TGATGGTAATGAAAACAGCCCTGAACTTGATGAACTCGCTGAAGCAGAAGTGCTCGTAAAAGAAAAGGCGTCAAAACGGCTTACAAATCCACTGGAAATT ATTTGGAAATCATTCAGCCTTATATTTTTTGCTGAATGGGGAGATCGGTCAATGCTTGCGACAATTGCACTTGGAGCTGCTCAGTCTCCTTGGGGTGTGG CAAGTGGAGCCATTGCTGGACACTTTCTTGCAACATGTATTGCCATTCTTGGAGGAGCATTCCTTGCCAACTACATTTCTGAAAAACTGGTTGGTTACTT GGGTGGAGGGCTATTTCTAATATTTGCTGTTGCCACATTTTTTGGGGTTTTCTGATTTATTGCTGCATAGCCCTACTCCTTTTTCCATTGAATAGTATAT TACTGATGGAGAGACAAAGAAGAACACGCAGAGAACTGAGGAAACTGCATACTTAAACTTGGTTGTAGATTTCATTAAGTAGACATTCTGCGCAAATTGC TCATATGCATAGATGATAAGAAGCTGTCATTAGGGAATGGAGATATGGAAGTATAATGTGAAACTTGTGTATGTACCAAAAAAAAAAAGAATAATGAGAA ACTTGTGTAATTTTTTCTTCTTCAGATAAAGCTACCCTGAAGATGTTGTCTATCAAAACATTTATAGCTTTGTTAGAAATGTAATTTTGTTTAATGGTCA TTCTTGGTTTGTCAGAAAATCAAGGTTGATTTGAATACCTGTATTTTTTATTAGTTGCAATAAATGAATTTATGTGTGTCTCAAAA
• Tissue: pods
• Gene name: LI_gene_174777;
• Additional information: details;

Expression of Ll_transcript_279817

FPKM

• PAB: 12.6
• PNAB: 12.1
• PS1: 8.6
• PS2: 3.2
• PS3: 7.5
• PW1: 8.5
• PW2: 8.1
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279817

• Blastp: Protein PAM71-homolog, chloroplastic from Arabidopsis with 69.62% of identity
• Blastx: Protein PAM71-homolog, chloroplastic from Arabidopsis with 66.28% of identity
• Eggnog: transmembrane protein 165(COG2119)
• Kegg: Link to kegg annotations (AT4G13590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413170.1)
• Pfam: Uncharacterized protein family UPF0016 (PF01169.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;