| Id Trinity | TRINITY_DN50116_c1_g4_i10 |
|---|---|
| Name Transcript | Ll_transcript_279699 |
| Sequence | AGAAACTCCATTCCTTTCTATTTGCTCTTCTTCTTCTTCTTCTTATTTTTTGTCTTCCTTTGTTTTCATATTCAACACAAAAATGCCAGCTGCTGGAGGA ATAGGTGTTAGCAATAGTGGGAAGGAGTACCCTGGAAACCTCACTCCTTTTGTCACAGTAACATGCATCGTTGCTGCAATGGGTGGCTTGATCTTCGGTT ACGATATCGGAATTTCTGGTGGGGTGACATCAATGGATCCGTTTTTGATGAAATTTTTTCCGGAGGTGTATAGGAAGAAAAAGGGAGTTGAAACGACGAA CAAGTACTGTCAATACGACAGTGAAACACTCACGATATTCACTTCGTCGCTATACCTGGCGGCGTTGTTGTCATCACTGGTGGCGTCTACGGTGACACGT AAGTTTGGACGGAAACTATCAATGCTTTTCGGAGGATTGATGTTCCTTGTGGGTGCACTTATCAATGGCTTTGCCGTCAAGATTTGGATGCTCATCTTGG GTAGGATCTTGCTTGGTTTCGGTATCGGCTTTGCCAATCAGTCAGTGCCACTATATCTCTCTGAGATGGCTCCCTACAAATACAGGGGAGCTTTGAACAT TGGCTTCCAAATGTCCATCACAATTGGTATTCTTGTAGCCAATATATTGAACTACTTCTTTGCAAAAATCAAAGGTGGTTGGGGATGGAGGCTAAGTTTG GGTGGTGCAATGGTCCCTGCCCTTATAATCACAATTGGCTCATTAGTCCTTCCAGACACTCCGAATTCGATGATCGAACGCGGCGATCGCGATGCAGCCA AGGCGCAACTTCAGAAAGTGCGTGGAGTTGATGATGTTGATGAAGAGTTCAATGACCTTGTGGCAGCTAGTGAAGCCTCTATGCTAGTGGAGAACCCTTG GAGGAAATTGTTGCAAAGGAAGTACAGACCTCACCTCACTATGGCCATATTGATTCCATTCTTTCAGCAATTTACTGGAATCAATGTGATTATGTTTTAT GCACCTGTGCTTTTTAGCTCAATTGGGTTTAAGGATGATGCTTCTCTCATGTCAGCTGTGATCACTGGTGTTGTTAACGTTGTTGCTACTACAGTGTCAG TTTACGGAGTTGATAAGTGGGGTAGGAGAGCCCTTTTCCTTGAGGGTGGAGCCCAGATGCTCATATGTCAGGTACCCTTTTTCTTAACCTTCAATGTAAT AATTAATTGGATGAATTATTCAATGAAGTACCTAATTTGGTAACTGCATTTGTTGAGATAGTTTATTATTGCTTATTGAATGATTTTAGAACAAAGATTT TGCTATCTTTGGTCCTTTCTCATATGGTGTCTCGGACCAATAAAAACATGTCATGTTGATTTAAAATTTGAAAATTCATTAATATTGTTATTTTTGCTTC ATTGGTCCATGATACCATGGGATAGAATCTGGGACAACAAATATATGTTTATGATTTTAAGCTTAGAAGTCAGGAATAAGGATCTATTGTCCCAAATCTT GTCCAGCACTAATGAAAACGTCATATCAATTGAAAAAATTCAAAATTCATTATTTTTCTGTTTTTGCTTCAATGTCATTGGTGGGAGACATGGTTTGGGA CAACAAATCCTTGTTCAGAAGTCGGAACAAGTGTATGGTGACATTTAATTTTGTCACATTTGAGTGGCATCCTATTTAATTGTTAACCCAATGCTTGTTG ATGTGCACAGGCTGTAGTTGCAGCTGCTATTGGAGCCAAGTTTGGAATTGATGGAAATCCTGGTGATTTGCCAAAGTGGTATGCTGTAGTTGTGGTGCTA TTCATATGCATTTATGTAGCTGGTTTTGCTTGGTCATGGGGCCCCCTTGGGTGGTTGGTACCTAGTGAGATCTTCCCCTTGGAGATTCGTTCTGCTGCAC AAAGTATCACTGTCTCCGTAAACATGCTCTTCACGTTCCTTGTGGCGCAAGTCTTCCTGTTAATGCTTTGCCACATGAAGTTTGGCTTGTTTATCTTCTT TGGTTTCTTTGTATTTGTGATGACATTGTTTATTTACTTCTTCTTGCCTGAAACTAAGGGCATTCCTATTGAAGAGATGGGAAGGGTATGGAAGGAACAC CCATACTGGTCAAGATTCGTTGAACATGAAGATTATGGCAATGGAGTTGAGATGGGAAAGGGAGCTACTAAGAATGTGTAATTAGTGCTGATTTTAAGTT ATTTTTATTCAGTGACTAGTTTTCATTTTGTTTCCATGTACAACATATTATTTGTGTCAATGTCAAGGTCATATAATGTATTGATTTGGTTCCAAGAATT AGAAGGTTATTTTTATCCTGGTATCAGCAAACAGAATACAAGTTTAAAGGATCCTTTTTCTAATATTGTATAGTTTATTATGTGTCTACTACATTTGAAA TCTTGGTTTTCATTTCATAAAACGTTTACATAAATCTATGTTCACTACAAGACTTTATGGGTTACATCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_174795; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279699
| Blastp | Sugar carrier protein C from Ricinus with 83.38% of identity |
|---|---|
| Blastx | Sugar carrier protein C from Ricinus with 81.59% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (8275367) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445620.1) |
| Pfam | Sugar (and other) transporter (PF00083.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |