Ll_transcript_280594

• Id Trinity: TRINITY_DN50120_c0_g1_i2
• Name Transcript: Ll_transcript_280594
• Sequence: AAAAAAGTGAAAAACATACTATTTTGGAATCAAAGGGACACACCGAAAGTGTTGCAATGCACTACTACTGTTGCTGATATGCGCCATTGAGTTTGCGATC CCATTCTTTCAATTTCCCTCTTCAGATCCAAATTTCCCCATTTCCATTCCCAATCTCAATCCCACCATCCTAATGGAGAGTAGTGACAGCAGTTATTCGA CCCACCTTATTGATGGAGACGGTATATTCAATGTTGCCGGCGTTGAAACTTTTATGAAAGAAGTAAAGTTGGCTGAGTGTGGGCTTTCTTATGCTGTAGT TTCTATTATGGGTCCACAAAGTAGTGGCAAGAGCACACTATTAAATAATTTATTTGGTACTAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAA ACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTAGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGCGGAGAGGATG ATACTGCATTCGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATAGTACTAATAAATATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGC AAATAAGCCGCTTTTGAAAACTGTTTTTCAGGTCATGATGAGATTGTTTAGCCCACGCAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGACC CCACTTGAAAATCTAGAACCTGTTTTACGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACAGGCTCACATGGAAACCCCACTTAGTGAAT TTTTCAATGTTGAAGTTGTCGCTCTTAACAGTTATGAAGAAAAGGAAGAACAATTTAAAGAGCAGGTCGCAAGTTTGAGACAACGATTTCATCATTCCAT TGCTCCTGGTGGGCTTGCTGGGGACAGGCGTGGAGTGGTTCCTGCTTCTGGCTTTTCATTTAGTTCTCAGCAGATATGGAAAGTCATCAAGGAGAACAAA GACCTTGACCTTCCTGCACATAAGGTCATGGTTGCCACTGTACGATGTGAAGAAATTGCCAACGAGAAGTATGCCGCTTTTGCTGCAAATGAGGAGTGGT GTCAATTGGAAGAAACTGTGCAATCTGGCCCTATCCCGGGATTTGGGAAAAAGCTCAATTCACTACTTGATGTGTATTTGTCAGAGTATGATGCTGAAGC GATTTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAGCAACTTCAAGAAAAATTGTTGCAACTTGTTCAACCTGCATTCCAATCTGCATTGGCACAT GTAAGATCTGGAACCTTGGATAAATTCAAGGAGACATTTGACAAGGCTTTAGAAAGAGGGGATGGATTTTCTGAAGCTGCTAATAATTGCAACGGGTCTT GTATGGCTGAATTTGATAAAGCATGTGCAGATGTTGTTGTTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCAGCGTGATATTGATGC ACATATTGCATCTGTACGTGCAGAAAAAATTTCGGAACTTACTTCAACATATGAGGAAAAACTGAAAGAATCCTTGGCTGGACCGGTTGAAGCTCTCTTG GACGGAGCTAGTAGTGAAACTTGGCCATCAATAAGGAACCTTCTTAGGCGTGAGACTGAATCAGCTGTTTCTGGGTTCTCTAGTGCACTTTCTGGGTTTG ATATGGATGAAGACACAAGACATAAAATGATTTTGAATATAGAGGATTATGCAAGGGGTGTGGTAGAAGGAAAGGCTCGGGAAGAGGCTGGAAGAGTTCT AATCCGCATGAAAGACAGGTTTACAATGTTGTTTAGCCATGACTCTGATTCAATGCCTCGTGTTTGGACCGGGAAAGAAGATATTCGAGCCATCACTAAG ACTGCTCGCTCAGCTTCTTTAAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGACGATGATGCTGACAGTATTGAGAAAACATTAGTAGTTGCCTTGG TTGGTTCATCAAACAATGCTGCTAATAGGAGCATTACAACGGTTGACCCGCTAGCTTCTAGTAACTGGGAACAGGTTCCATCCTCTAATACATTGATCAC ACCTGTCCAGTGCAAATCTTTGTGGAGACAATTCAAGACCGAGACAGAGTACAGTGTCTCACAGGCCATTTCTGCACAGGAGGCCAACAAACGTAACAAC AATTGGTTACCTCCCCCATGGGCAATAGCTGCTTTGGA
• Tissue: pods
• Gene name: LI_gene_174808;
• Additional information: details;

Expression of Ll_transcript_280594

FPKM

• PAB: 1.2
• PNAB: 2.8
• PS1: 2
• PS2: 1.4
• PS3: 1.7
• PW1: 2.4
• PW2: 2.7
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280594

• Blastp: Protein ROOT HAIR DEFECTIVE 3 homolog 1 from Arabidopsis with 76.74% of identity
• Blastx: Protein ROOT HAIR DEFECTIVE 3 from Arabidopsis with 77.66% of identity
• Eggnog: GTPase activity(ENOG410XPVJ)
• Kegg: Link to kegg annotations (AT1G72960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443496.1)
• Pfam: Root hair defective 3 GTP-binding protein (RHD3) (PF05879.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;