Ll_transcript_280596

• Id Trinity: TRINITY_DN50120_c0_g1_i4
• Name Transcript: Ll_transcript_280596
• Sequence: GTTTTCACACCATAAATGGTGCAACACTTTCTGTGTTTATTTGATTTGATGACAATTATCAAAGGCATTGAAGCAGAGACATATTAATAATGAAAGCGAC ATGTTTGATGAAATAACTCTGTGACTCTGATTTCATAATTTTCTGCATTTAGATCTTTCTATTCTTCAATTTCAATTGCGATCACATTCATAGTTCAAAC TCCACGCAGATGTCGAACAATGAGAGTTGTTCCACCCAGCTTATTGATGGAGATGGTACATTCAATGCTGCTGGGATTGAAAAGTTCATGAAGGAGGTTA AATTAGCAGAATGTGGACTTTCCTATGCTGTTGTTTCAATCATGGGTCCACAAAGTAGCGGCAAGAGCACACTATTAAATAATTTGTTTCATACCAACTT CAGAGAGATGGATGCATTTAAGGGAAGGTCTCAAACAACCAAAGGAATTTGGATGGCTAATTGTACTGGCATAGAGCCTTGTACGCTTGTCATGGATTTG GAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTTTTTGCCTTGGCTGTTTCTGATATAGTGCTAATAAACA TGTGGTGTCATGACATTGGACGTGAGCAAGCTGCAAATAAGCCACTTTTAAAAACTGTGTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAAC ACTTCTGTTTGTCATACGTGATAAAACAAAGACACCACTTGAAAATTTAGAACCTGTTTTGCGGGAAGATATCCAGAGGATATGGGACTCCGTTCCTAAA CCACAGGCTCACACAGAAACTCCACTAAGTGAATTTTTCAATGTTGAAGTTGTTGCGCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAGCAGG TTGCCAGCTTGAGGCAACGATTCCATCACTCTATTGCTCCTGGTGGGCTTGCGGGGGATCGACGTGGAGTAGTTCCCGCTTCAGGCTTCTCTTTCAGCGC TCAGCAAATCTGGAAAGTCATTAAGGAGAACAAGGATCTCGACCTTCCTGCACACAAGGTCATGGTTGCTACTGTAAGATGTGAAGAAATCGCCAATGAG AAATATACCCTTTTTGCCGCAAATAAGGACTGGTGTCAGCTGGAAGAGGCTGTGAAATCTGGCCCTGTTCCTGGATTTGGGAAAAAACTCAACTCACTCC TTGATACATGTCTTTCAGAGTATGATGTTGAAGCCAATTATTTTGACGAAGGTGTGAGATCTGCAAAACAAAATCAGCTTCAAGAAAAATTGTTCCAACT TGCCCAACCATCATTCCTAGCTGCGCTAGGACATATAAGGTCTGCAACTTTTGATAAGTTCAAGGAAGCATTTGACAAGGCTTTGAATGGGGGGGAAGCG TTTTCTGCTGCTGCGAATAATTGCATAGGGTCATATATGACTCAATTTGATGAAGGATGCACAGATATTATTATTGAAGTAGCAAACTGGGATACATCTA AAGTAAGGGAGAAAATACAGCGTGATATCGATGCACATGTTGCATCTGTACATTCAGCTAAGATGTCAGAACTTACCTCATCATATGAGGAAAAACTGAA GGTGGCCTTGTCTGGACCTGTTGAAGCTCTTTTGGATGAAGCCAATAGTGATACTTGGCCATCAATAAGGAGCCTTCTCAGTCGCGAGACTAAATCAGCT GTTTGTGGGTTTTCTGCTGAGCTTACCAGATTTGATATGGATGAACAAACAAGGAAAAACTTGACAGTAAGTTTAGAGGATTATGCTAGGGGTGTGATAG AAGCAAAAGCTAGGGAAGAAGCTGGCAGAGTTCTAATCCGTATGAAGGACAGGTTTACAACAGTATTTGGTCGTGACTCTGATTCAATGCCTCGTGTTTG GACGGGAAAAGAAGATATTCGAGCCATCACCAAGACTGCCCGAATCGAATCCTTGAAGCTGCTATCTGTTATGGCTGTAATTCGTTTAGATGATGATGAT ACTGATAATATCGAGAAAACATTAGCAGTTGTGTTGGTGGATTCATCAAGCAGTTCTGCTAAAAATAGAAGCTTCACAGGAGTCGATCCACTGGCTTCAA GCACTTGGGAGAAGGTTCCATCTTCTAAAACATTGATCACGCCTGTCCAGTGCAAATCTTTGTGGAGGCAATTTAAGATGGAGACAGAATATAGTGTCTC TCAGGCCGTTTCTGCACAGGCGGCAAACAAACGCAGTAACCACTGGTTACCTCCGCCATGGGCGATTGTTGCTTTACTTATTCTTGGATTTAATGAGTTT ATGACACTTCTAAGAAATCCCTTGTATTTGTTTGTCATCTTTATTGGGTTTCTTCTCATTAAAGCCCTATGGGTGCAACTTGACATTAGGGGTGAATTTC GCAATGGAGCTCTTCCAGGAATCATATCTTTGTCTAACAAGTTCATTCCAACTATTATGAACATTATGAGAAAACTAGCAGAGCAGGGAGAGAGTCCAGC AACTAACACTTCGCAGAGAAATCAATCAAGAAGCAATCAAAATCCTGATAATGCTGATAGTGCAATGTCATCTACTGCTTCTTCATCTGATATAACTTCA TTCAACGATAAACCAGAATGCACCGGTTCATCCAAGAATGACTAGAGATAGAAACTCATCTTTTTGAAACAAATAATTTCTGTTGAAAGTTGGCAGCAGG CAAGTTTTTTTTTTTTTTTTTTTGCTTTTCCACGAATTTATAACTTGCAATCATTTTTTGACCCATTTAAGTTGATAATTTGTCTGATTTTCTATTATAT ATATAATTGACTGATAACTGATAAAAAA
• Tissue: pods
• Gene name: LI_gene_174808;
• Additional information: details;

Expression of Ll_transcript_280596

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 1.1
• PS2: 0.8
• PS3: 0.3
• PW1: 0.4
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280596

• Blastp: Protein ROOT HAIR DEFECTIVE 3 from Arabidopsis with 73.69% of identity
• Blastx: Protein ROOT HAIR DEFECTIVE 3 from Arabidopsis with 73.44% of identity
• Eggnog: GTPase activity(ENOG410XPVJ)
• Kegg: Link to kegg annotations (AT3G13870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448212.1)
• Pfam: Root hair defective 3 GTP-binding protein (RHD3) (PF05879.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;