Ll_transcript_280705

• Id Trinity: TRINITY_DN50127_c0_g1_i26
• Name Transcript: Ll_transcript_280705
• Sequence: GGTGCGTAAAAGCGTGTGGTCAACTTGGTCGTGGTCTCTAGGGTTTAAAGCATGTTCCGTTGTTGCGAAAGTAGAATTTGAAAGAAAACGCCAGCGTCTT AAAGATCTTCTTTCAATCGTGGTAAAGGGCACAATTCAAGATGCGTAGGAACAGTCCTGGATACTACAGTCCTCCAAGAAGAGGTTACGGCGGTAGAGGC AGATCACCACCGCCGCCGCCGCCTCCTTCTAGGAGAGGACACGGTGGTGGAGGAGGAGGTAGGCGCAGAGAAAGCAATAATGGAAGCCTTTTGGTGAGGA ACATTCCCCTCGATTGTCGATCTGAGGAGCTTCGAGTCCCGTTCGAGCGATTCGGTCCGGTTCGTGATGTCTACATTCCAAAGGACTATTACTCAGGGGG GTATGTTGGTTTGAAATTGAAGTTATAAACCAAGTCCAAGCCCCAAGTTTTGAAGAGGATATCTACTCACTCTTTAACATATTGCTCTCAATTCAAGTGT TGTTAATCTTCATACCAAGATAAACTATATAATTACACAATCAATACACAAGTTTCATGGAATGGAAGGTTGATTCTTATCCAACTGAAGACTTAGTTTG TTTGGAGCTTTGAATTCAAGTGCTTCTTATAAATACACAAGAATCAATATTGAAGTCTTGAAGGTTTTTCAAGTCATTTCCTTTACTACATGAATTTAAA GATAAAGGACAGCCATTAAGCTTTGGACTTAGCAGATTTAGTAATATTTTAGCATCCACTGCTTTGTTCATGTCACAAGAGAGCCATAGTAAGTTGTCTA AAGAAAGCTATAGTAAGTTATGTGATTTGAGGTGCTTATTTCCGGACAACCCCGCGGATTTGCATTTGTGCAGTTTGTGGATTCTTATGATGCATCAGAG GCACAGTATCATATGAACAGACAGATTTTTGCTGGAAGGGAAATATCCGTAGTTGTGGCTGCAGAGACAAGAAAGAGACCAGAGGAGATGCGTCATAGGA CTAGTAGGTTCAGAGGATCAGGGAGCTATGGGGGGCGAAGGTCTTCGCATTATGGGCGTTCTCGATCTCGCTCAATTTCCAGATCTCGCTCACGCTCACC ACCTTATCACTCTGGTTCTAGAAACCGATATCACTCAAGGTCCTATTCTCCTGCCCCTAGACGGCATAGTGACTACTCTGTTTCCCCTAGAAGGCCAGTT GAGCATCCAAGATCACCAAGAAGTCCTCCCAGGGAGCGAGATGGTGATCAAAACCGCAGGTCATATTCTCCTGGTGAGCGAGATGGTGATCAAAACCGCA GGTCATATTCTCCACCTTATGGTGACGGTGCTGATCAGAACCCAAACAATGGATATGCAGAGAAAGTCATATACAAGTCTGAGGCTGATCGAGAACAGTG GAAATCAAGTAGAGCATCAAGATCACCCCCTGGATCTAGATCAAGGACTCCTGATTTGTCACCCAGACATGGAAGATAAGGTTGTTCGGCAACATGCTGC TTGGTTTTGTACAACTTCTTAAATTATTTTCAGGATATTTAAGGACACCAAATTATGCTTAAAGTTTGTGTATTTGATGGATTAGTGTGTAATCTCAGAT TTGATACTGATTTGCAATTTGACATTCTGAACTTATATGGTAAAACTTAATTAACAACTATGATTGATGAAAATTGTTTTGAGCTTGTCGAACATCGTTT ACGTGTGCTCAGCTTAATTGCTGCAGTTGCATCACTGTAAATTGTGAACGAAATGGGTAACTTGTTGCTAAAATAAGTTCGTATGCATGAAGAAATTTGG ATTTGAGATCTGTTACAGGTAGTTGTTGCTTTGGTTGGATAAACACCTTAATTGAGTGATTATGTTTGCAGAGTTTGTAAACAGTATATAGTTTTGAGTC AGTAGATAGTGTTTCAGTTTTGTGTTGATTACTTGATTATAAGGTCGAATAAGATCTTAACTCATAAGACAAATTAAGCATCTTACTCACGCACCCGTTT CAAATCCTCGTACTACATGATGCAATGTTGTTTAAAAAAAATTATTATCATTGTACATGGTTTTACTCATGATTATAAAAAATGTTTCACTTTTAATTCC ATTTGTTGTTTCTAAAACTTTATGAAAGCATAAAACAAGTTAC
• Tissue: pods
• Gene name: LI_gene_174848;
• Additional information: details;

Expression of Ll_transcript_280705

FPKM

• PAB: 3.8
• PNAB: 8.1
• PS1: 5.8
• PS2: 2.4
• PS3: 3.1
• PW1: 6.3
• PW2: 3.5
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280705

• Blastp: Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 76.67% of identity
• Blastx: Serine/arginine-rich SC35-like splicing factor SCL30 from Arabidopsis with 77.78% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT3G55460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456725.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;