Id Trinity | TRINITY_DN50127_c0_g3_i1 |
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Name Transcript | Ll_transcript_280671 |
Sequence | AAAAATCATTCTATCAAATTGATAAATAAATGATACAAAGAATCAATGGCACTTCCATCCTCTGTTTTTTATTTTGAATATTCCTTCATGTGTTTCATAA TTGTATAATTTTATATAAAATTATTCTATTCATTTCAAACATCCTGGTTATGTATTAATTTGATATCGACCAAAGCATTTTCGTGTGCACTGCTTGTCAT CATGTCGGTCTCGCCTGCAAGTTGTTTTTCCTTTTCAATTAGAGCCTGCACGTTGTTTAGAAGCTTAGACATTTTCTGTTTTCAAACTCAACTTTTCCAA TATTAGGCTGCAACTTCTATCCTTTTAATAGTTGATAGGAATATGAAAAGGTTGATTCAAACTCGAATGGCATTCATTTCAATTGTTCTATCACTTGATA CTCGATAACTTTAAACTAAATCAATGAAATTACCACTATTTTCAGGAGCTCAGCAGTTGATGGACTCTTACCCTAAGAGTGGTGATAAGAAAACTTTAAA GAGGTCGTTTTTTATTGATAAGAGTTGGGTGAAATAGTAACCTTGTAGATAGTTCGATTTGTGGTCAATACTACTCAAATTTCTCACATTGTTGCTGCAC CGTGTATTGGTTTACAAATCTGGATCCCATGGACTTGAAGTCAAATCATACACCTGTTCTCACTGATTCTGCTGCACCCATAAATATAACAAAGTCAAGA CTGGGTGTGCATTCTAGTTTGTTGCCTTACTCCCCTACTGGGACAACCATTCCCCACAGTATGTTATTGACTATCCCAAGGAAGAAGGCCGGATTTCTTG AAGATGTTCGTTCCAGTGGTTGGTTGGATTCCATGAAATCATCTTCTCCTCCACCCAGAAAGATAACAAAGGATGTTAGTCTTGGATTTGCATCATCTGA AGCTGACTCTTCTTACTTTTCCTGGCTGCTAAAGTATCCATCGGCACTTACATCTTTTGAGCAAATCACAAACTATGCAAAAGGGAAGAGAATAGCACTG TTTCTGGATTACGATGGAACTCTTTCACCAATTGTGGATAATCCAGACTGTGCTTTTATGTCTGACAATATGCGTGCTGCCGTTAAAAAGGTTGCAGAGT ATTTTCCGACAGCTATAATCAGTGGAAGAAATCGTGACATGGTGTATGAATTTGTAGGACTAACAGAACTCTATTATGCTGGTAGTCACGGGATGGACAT CATGTGCCCGGTTAAGTCTACTAACAACCAAAAGCAGGATATGGAAGTTAATTTATTCCAACCTGCTGCTGAATTCCTGCCCATGATTGACGAGGTATTT AGGTCACTTGTCGAGACTACTAAAGACATTAAAGGAGCAAAAGTTGAAAACAATAAATTTTGTGCCGCTGTACATTACCGCAATGTAGATGCAAAGAATT GGGATTTGGTGGGGCAATGTGTCCATGATGTCTTGAAGGGCTATCCACGTTTGTGTTTAACTCACGGGCGCAAGGTTTTAGAGGTCCGACCTGTGATTAA CTGGGATAAGGGAAAAGCTGTCACATTTATACTCGAGTCACTTGGACTTGCCAATTGTGATGACGTGCTTCCGATATATATTGGAGATGACCGAACAGAT GAAGATGCATTTAAGGTTTTGAGAGAAGGAAATAAAGGCTATGGCATCTTAGTGTCTTCAGCACCAAAGCAAAGCAATGCAAATTACTCTCTTCGTGATC CATCAGAGGTGATGGAATTTCTGAAGTCACTAGTGGTATGGAAGTCAAGTCAAGCCCTTTGAAAAGCCTTATATAGTGTATATAGAGAGGAGATTATACT CTGCTACATATATACTATATATTATAAAAATAGACTTTATGTTTCGATTTTGGTTCTTCTAAGAAACATTTCAAGAGGTTTCCTGCAGCATATTTGCGGA CAGAAGACCTCCTCCTATGGTAGCAACTACCATGTGTTTTTGCTCAAAGCTCCTCTAGTAACTGTAAATTGGTGCCTCATAATTTTATTTATCTTAAATC TCATTTTAAAAATCTACAGTTTTTCTTTTGTTTCTTCATTCAATTTGTGTAATTTTTTTAATCATTTCTGCTTCAGTTTTGGTCACTATATCAGCTTTTG ATTCTAATTCTGTGTATCCACATTATATCTGATTCTATATATACTGGAATGAAAAACTTGAAGCCATGATTATGTAGTTTTTTATTTATTCCTATTCAAA ACTCAATTCGAAAAAAAâBLAST |
Tissue | pods |
Gene name | LI_gene_174850; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280671
Blastp | Trehalose-phosphate phosphatase A from Arabidopsis with 66.5% of identity |
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Blastx | Trehalose-phosphate phosphatase A from Arabidopsis with 66.5% of identity |
Eggnog | trehalose biosynthetic process(COG1877) |
Kegg | Link to kegg annotations (AT5G51460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413839.1) |
Pfam | Trehalose-phosphatase (PF02358.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |