Ll_transcript_278572

• Id Trinity: TRINITY_DN50130_c1_g1_i6
• Name Transcript: Ll_transcript_278572
• Sequence: CAATAAACGTAGCAGCATCTGAATTTGAATGCTGTAGCATTGAGGAATGGCATCCTCAGAGATCGTGGTTGGATTATCATCATCAGATTCCAAACCCAAC CAAAACCACGATCAGGATCAACCTTCCATTCTCGATGTTTTCACTGCCTCTGCTCATGGCCATTTTCCCAAATTGAGGTCTTTCGTTGAACAAGATGCTG CTTCCGTTTCTGTTCCTGATGTTAATGGTTATTATCCTCTTCAATGGGCTTCTCTTAATAATTTCCATGAGATTGTTAACTATATCATTCAGCATGGGGG TGATGTTAATGCTACCGACTACATGCAACAAACGGCACTGCATTGGGCGGCAGTTCATGGTTCAACTGCAGCTGCTGATGTGCTATTGGAGAATGGAGCC CGGGTTGAAGCTGCAGATATAAATGGATACCGGGCAGTTCATGTTGCTGCACAATATGGACAAACAGCTTTCTTAAATCACATTGTTGTAAAGTACCATG CTGATTTTGATGTGCCAGATAATGACGGAAGGAGTCCACTTCATTGGGCTGCATATAAGGGATACGCTGATACAGTAAGATTACTTCTATTTAGAGATGC AAGTCAAGAGAGACAAGATAAAGATGGGTGTACACCGTTGCACTGGGCTGCATTAAGAGGACATTCAGAGGCGTGTGCTGTGCTTGTACATTCAGGCACA AAGAAAGAACTAACAGTGAAGGACAATGCTGGATTCACTCCTGTGCAGCTTGCAAATGATAACGGTCATCGGCATGTCGCCCCTTTCCTTTCTAATCAAC AACGGGCTCATAGCAACCACTGGAGACGAAAATTTTGTAGTTTGATGTTTACAAATACTGGTTATGCTCCTATCTTATTCTGTATTATAGTCTTTCTCAC GATCCTCTTCATCAACTCAGTCGTTGTAGCTCCTAATCTTAAAAAGATTACTGCTGTTGTTGGACTTTGGGCCTGTACAACTTTTTCTCTAGCAGTTGGT TCCCTGGTTATGTTTTATAAATGTAGTAGCAAAGATCCAGGTTACATAAAACGGCCAGGAGACTTAGGTACTCAAAGTGATACAGAGGATCCTTTGTTGC ATATTGATCTGAATAGCTCATCTGTTTGGGTGGGAAATTGGTCCCAACTTTGCCCTACCTGCAAGATTATAAGACCCGTGCGATCTAAGCATTGCCCTAC TTGTAACCGTTGCGTGGAACAGTTTGATCACCATTGTCCGTGGATTTCTAATTGTGTGGGAAAGAGGAACAAAAGGGATTTTTTTATCTTTATCTGCTTT GCAACTTTGACTTCTTCCTTCAGTGCTGTCATTACAGTTCAAAGAATTTGGACATCTACAACATCATTATCAACAGGAGAAACATGGTTCCATCATGTGT TGGTTGGACATCCTAGTGTTATTGTATTTTTGGTGATGGACGCTGTTGTTTTCATTGCGGCTATAACTTTGACAATAACCCAGGCTTCCATGATAGCTCG AAATTTGACCACAAATGAAGTTGCAAATTCATCCCGTTATGAATATCTTCGTGGTCCTGATGGACGATTCAGAAACCCATATAACAACGGTTGTTGGAAG AATTGTACCGACTTTGTTCTTCTTGGCTACTCAGATGATGATCACATTGCTTGGCCTCCATTACAGCAGGTGGTGATTTAGGACAATGTCCCTTGCATCG ACTCACCCTTTGTTATATTATTCTATAGTTCTAATTGGTAAATATGCAGATGGTAGTTTGCAGCTAGGGTCTTTGTTCACTGATACATGTACATTTTGAT TAAAGAGCAAAAAGAAATACAACATTTTTCATTCTGGCCTTCACAAAACTTTGAAGGAATCATTTTCCCACTGCATTCATCATTGTATCAATTGTTTCAG AACTTTGAAGGAATTCAAAAATGTCATGTGTTTCAATGAATTATTGAATCTACCTGGTTTATCATGTACGTTTATCGCGTCTCCATTTTTACCTTCTTTC AAGAACAAACTTGTATCCTTAATAGTTAGGATTTAAGGCCAGGAAGAGTGTATAGTTGATGTAAGTGGCAAGTAGTCTTCAATTTTTGCATG
• Tissue: pods
• Gene name: LI_gene_174865;
• Additional information: details;

Expression of Ll_transcript_278572

FPKM

• PAB: 16.5
• PNAB: 11.9
• PS1: 15.3
• PS2: 11.4
• PS3: 14.6
• PW1: 11.4
• PW2: 13.1
• PW3: 14

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_278572

• Blastp: Probable protein S-acyltransferase 23 from Arabidopsis with 58.32% of identity
• Blastx: Probable protein S-acyltransferase 23 from Arabidopsis with 58.32% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT2G14255)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421924.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;