Id Trinity | TRINITY_DN50141_c0_g1_i11 |
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Name Transcript | Ll_transcript_279113 |
Sequence | TTACATTCCCGTTTTAAAAAAACCATTCTCTAATGCGTAATATATTTATTATTTTATAAACGATTCCAAAGGGGATAAGCAAATACCTAAACCATTCTCA AAACCCTTGTGAAATTAATCAGAATTCTTCTATCAACCCCAAATGCCAACTCTCATCAACCTCAGAGTCGCTGAAACCCTGGAGAGAGAAGAAGGGATGA TCGTCGATATCAAGGTTAATGGCGCCGTGCTCACAAAGGTCTCAAATGTTCTATAAATTCTGTATCCAGCAACATTGAGTTTTCCGATAGTTTAGAGAGA AGCTCTGATGCGTTTAGGTTTTCAACTAGTGGGAAGGAGAGCTTGGATTTCAATGAATTGAATAATCAACGAGGTTGGGGTTCCACTGAGTCTGTGTTGA GTTTAGAGTATCCATCTACTCGTGTTTCTTCTTCCAAGCATGAGGAGGATTCTGGTAATGAAACGGGTTTTGATGCTAAACGGTTCTCTGTTGTGGCTTC GGATGTGGATGGTTCCGTTGATGATAGCGATGCTTTGAATGAGGATTTTGATGTGGAAGCGGAGGTGGAGAATGTTACTAAACCGGTTAAAAGAGAACCG CTTACGAAGGGAAAGAAAGGGTCTTGCTATCGGTGTTTCAAGGGGAATAGGTTTACAGAGAAGGAGGTTTGTTTGGTTTGTGATGCAAAGTATTGTAGTA GTTGTGTGCTTAGAGCAATGGGGTCCATGCCAGAAGGTAGGAAATGTGTTACTTGCATTGGATTCTCGATTGACGAGTCGAAAAGACAGAACTTAGGGAA GTGCTCTAGGATGCTCAAGCGGTTGCTTAATGATTTGGAGGTTCGACAGATAATGAAGGTGGAGAGGTTTTGTGAAGTGAATCAGCTTCCGCCTGAATAC ATTTATGTTAATGGGAAGTCACTTTGTTATGAGGAGCTGCATACATTGCAGAACTGTCCAAACCCGCCAAAGAAGCTATGTCCAGGAAACTATTGGTATG ATAAAGTTTCTGGTCTCTGGGGGAAGGAAGGACAGAAGCCTTCTAGTATTATCAGTGCCCATTTGAATGTTGGAGGGCCCATCAAACTGGATGCTAGCAA TGGAAACACTCAGGTTTACATTAATGGTCGTGAAATAACAAAAGTAGAGCTTCGGATGTTGCAGCTGGCAGGAGTTCAGTGTGCTGGAAACCCACATTTT TGGGTCAATGAGGATGGTTCATACCAAGAAGAGGGACAGAAGAATACAAGAGGGTATATCTGGGGAAAGCCTGGAACGAAGCTTGTATGCGCTTTTCTGT CCCTGCCAGTGCCTACTAAATCGTCAAATTCTTATGGAGAACAACACTCCAATCTAGTCAACAGAACAGTTCCCGACTACCTCGAGCATGGAATAGTTCA AAAGCTTCTCTTAGTTGGTTGCAGTGGATCTGGAACGAGCACTATCTTCAAGCAGGTTTTTAGTTTCTATTCACAATTATCTGTGAATTAAGTCATGATT AATACTTTCTTTTTGTTAGGAACATTAAATTAGTCAATATTTTTGCCTGTTAGTTCACTTATAAAACTGATAGGAGAGTAGCCTCTGGGAGTAGTCTAAA GTCTAAACATGAGCATCAATCTAGTAACTCATAGTATATTGTGCAAATCAATAGTGTCAGTCCTGCGAAGTTTGCTGTAGCTTTAGGTGTTAATTGGATC CACAGCTGTGTCACTGCCTTTTGTCTCGTCTACTATTCCCTGGTATAGCAATGCAAATTGGTGGTAAATGGCAACTGACTTTGTAGTTGGACATAGTATG GGATTGTATGTTATATATGGGTACTTGAGGCATTGTTGAAATAAAATTTTGACCACCCCCTCCTCTCCAAAGAAAAAAATATCTACAGAATTGCTTGCAG AAGTTAACGAGTTCATAGAATTGTAAATATGTATGGCAGGCCAAGATTCTTTATAAAAGCGTCCCCTTCTCAGAAGAAGAGCAAGAAAATATAAAGTTGA CCATTCAGAGCAATGTTTATGCCTATATTGGCATACTCCTCGAGGGCCGTGAGCGATTTGAAGATGAAATTTTAAAGGATTTAAAGACAAGACATTCTTC TGAACTTGATATCACAGGTATTAGTGCATATTCTTCCTCCATTTCACTCCTGTGTAATATTTATTTTATTGAGGTTTGACTGAGCAGGCAAGCTATTTTT ATATGGTAGTATGCATCCACTGTACACCATCTAGTTGTCAGTCCAAATGCTAAATGGTTTGCAGCATGCTTATATGTTTGTTTAAGGCATCATTATGGTT CATATTCTGTTTTTATTGCCTCATTCCATTCAAAAGTGTTGTGACTGTTCACATTTATATATTAATTATTGTAGGTTGTATATCTATAAGGACATATTAT GTTTTACCTTTATCTTAGCTCTAGTTTAGGCAAGTAAAACCATAATCTATATATTATGTAAAACTCTGTACAGTCTTCTATCATTCAGTAGTAGCATTAT TAAGACTTCTCCATTCAAATAGAAGTAAAAACAAGAAATCCCACTCGTTGAAAATGCTTTGAATATAAAAGGATTGTATATTATCTTATTTATGCCAAGT GTCAAGTTGGCATAAGTCTCAAGCTAAGTTGTGATAACTAGTATATTTCTTCATTATTTTGGACCACATGAGTGACATGACTGCTGTAGAATATTATTTT CTTTTTAATAGTAGTGGTTATAGAAAATGTGTCCATGTTATCAAGAGGACTTAATATTGTGAGTGATGTACTTATTAAGATTTAAAGACATTACGATATT AATGACAATATATATTCAACTATGTGATGGTCATTGTATACTCTAAGTCTCAAGCTAATGTAGTCAATAGTGCAGTATGTGGCCACCGCTATCACGTAGG CTCCCTGTGATGTCCAGTTCGCCATGCCACATTTTTTGTGGAGAGGCGAATTATGACCGCTATCAATGTTAATTGCATCTCTCATGGATGTTATCTGATG CAAGGGAGAAATCCCCATTTTCTTCTTGTTTTTTGCCCTCTCCCATTCTGTGGACATTTAAGTCATTCCCGACTTTCTTTAGGAGATTCTAGTTATTCCC TGCCTTCCATTTTGCCAGAAATCATTTAGGGTCACATACTCATCTTCGACGAGTTAGCCCCCTACCCACTGCAGCTCAACATTCTGGCAACCCACCATTT TTGTGTGCCAAACTCTGCCATTTCTGGCAGCTCCTCCTTATTCCTGCAACTGTGCTGTGCTAAGAGGTCTTTACAACCCCTTTTTGCAGCAACCGTCTTC TTTCCATAGGTCTCTGCTCTGTTCTGTTTTTGGACTCCCTTCTTTTTTATTCTGTTTCTGTCTTACTGTGTACTTAGAAGCCCACATTGTTTTTTACTTT TGCTTCTGTATTAAGCTTTATTTTTTTCCTTTTATGGTTACTGTGTACTTCACATCCCATGAATATTTTGGCATCATCTTCCACCATTAGTTCTTTAGTT ATGCCTTAGATTGACGGTGATTGTATTGCTACACTCTATATTGTGACTGCTGATTATTGATGATGAGTTTGCCTTACTTTCGAGTTATTTTTTATTATGG AGCATTTATATGGGTGATTGCTGAGTAAGAAGTTGTTTCATGTTTAGCTGTCTCATTTCAGTCATTTGTACTAAAAGATTGACTGGTATAATTATGGTTT ACTACAGGAACCAGCTCGAAACTTGATGATAAGACAATATATTCTATTGGCCCAAGGTTGAAAGCATTTTCTGATTGGTTGCTAAAAACTATGGTGTCTG GCAAAATTGATGCTATCTTTCCCGCCGCTACTCGTGAATATGCACCATTAATTGAGGAGTTATGGAATGACACAGCCATGAAGGC BLAST |
Tissue | pods |
Gene name | LI_gene_174941; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279113
Blastp | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 78.04% of identity |
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Blastx | Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 67.08% of identity |
Eggnog | Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ) |
Kegg | Link to kegg annotations (AT2G23460) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444718.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |