| Id Trinity | TRINITY_DN50141_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_279114 |
| Sequence | AAGGGGATAAGCAAATACCCAAAACATTCCAAAGGGGATAAGCAAATACCCAAACCCTTCTCAAAATCCCAAATAATCAGAATTCTTCTATCAACCCCAA ATGCCAACTCTCATCAACCTCAGAGTCGCTGAAACCCTAGAGAGAGAAGAAGGGTACGGTCATCGATATCAAGGTTAATGGCGTCGTGCTCAAAAAGGTC TCACAAGTTCTGTATCCAGCAACGTTGAGCTTTCCGATAGTTTAGAGAGAAGCTCTGATGCGTTTAGGTTTTCAACTAGTGGGAAGGAGAGCTTGGATTT CAATGAATTGAATAATCAGCGAGGTTCGGGTTCCACTGAGTCTGTGTTGAGTTTAGAGTATCCATCTACTCGTGTTTCTTCTTCCAAGCATGAGGATGAT TCTGGTATTGAAACGGGTTTTGATTCTAAACAGTTCTCAGTTGTGGCTTCGAATGTGGATGGTTCCGTTGATGATAGCGATGCTTTGAATGAGGATTTTG ATGTGGAAGTGCAGGTGGAGAATGTTACTAAATTGGTTAAAAGAGAATCGCTTACGAAGGGAAAGAAAGTGTCTTGCTATCGGTGTTTCAAGGGAAATAG GTTTATAGAGAAGGAGGTTTGTGTGGTTTATGATGCAAAGTATTGTAGTAGTTGTGTGCTTAGAGCAATTGGTGTCGAGGTTAACAAGCAGTGAATGATA TTGAGTTGAGAGTGCTAAAATGGACAAAGAAAAGAGAGAAAGTGAAACTATTGTTAATGATGAAGATGACAACAATTGTTGGTGGTGGTTGGTTCAAAAA GGAACAGCAGTTACATTTGTTACAATTGCATTGTTTGGATTCTTGATTCGTGTTGCGGTGTCGACCTATCCTTACTCTGGTGCTGGGAACCCTCCGAAAT TTGGTGATTATGAGGCGCAGAGGCATTGGATGGAGATTACAATTAACCTTCCGATTCGAGAATGGTATAGGAACAGTAGTAGTAATGATTTGAGTTATTG GGGACTTGATTACCCGCCTCTTACTGCGTACCAGAGTTTCGTTCATGGTCTTTTTCTTAGATTCTTCCACCCTGACTCTGTTTCGCTTTTCGCTTCCAGA GGTCATGAATCCTATCTTGGAAAGCTACTGATGCGGTGGACGGTGTTATCATCTGATGCCTTGATATTCTTTCCCTCTGTCCTATACTTTGTTACCGTTT ATTACAATAAACCTGGAAGGATCCGTAAAAGTGATGTAGCATGGCACATTGCTCTGCTTTTACTAAACCCATGTTTGATCTTAATTGATCATGGTCACTT TCAGTTCAATTGCATCAGCTTGGGCTTTACCATTGGAGCAGTTGCTGCTATCCTCTCTGAGAAAGATCTTGTTGCTTGTGTTTTTTATTGTCTGTCTCTA AATCATAAACAGATGAGTGCATATTTTGCCCCGGCATTTTTCAGCCATCTCATGGGTAAATGTTTGAGGCGCAAACATCCACTGCTACAGGTGTTAAAAC TGGGGTTGTATGTTTTAGGAACCTTTGCAGCTGTGTGGTGGCCTTATCTGTATTCAACAAATTCCATTTTGGAGGTTCTCTCTCGTCTTGCTCCGTTCGA AAGAGGACTATTTGAGGATTATGTAGCCAACTTTTGGTGTGCCACTTCAGTTCTCATCAAGTGGAAGAGATTGCTTACAACAGACTCACTGAAACTTGTC AGTTTCACTGCAACAATTATAACCTGTCTTCCTTCAATGGTTCAACAAATAAAGTCTCCGAGTAACCGGGGTTTCCTTTATGCGCTGCTGAATAGTTCTT TCTCATTTTACTTGTTTTCATTTCAAGTGCACGAGAAGTCAATTTTGCTGCCACTTCTTCCTGCAAGCCTGCTCGCAATGGAGGATCCTTCTACCTTTAA GTGGTTCGTGCAATTCGCGATGCTCTCGATGTTCCCTCTGTTGTGCCGTGACGACTTGGCTGCTCCATATTTCGCTTTACTCGCTCTCTTCACCCTGATA TTCAATGCACCAGGTCAACACATAGTTAAAGAGAATAACTTTTTATATCATTATTTGGGCACAAGAACCATGAACTTTATTTTATGTTTCTCTGCTATTC TTCACATAGTTTACTTAACCATGCATCCACCTGAGAAGTATCCTTTCCTTTTTGAAGCAATAATTATGAATCTGTGCTTCTCTCAGTTTGTGCTTATAAC TCTTGGCAGCAATATAAAGCAGTGGATGCTAAATAAACCTGTCAAATTAGAAATAGAAAAGAAGCACAATTGACATTGATTTTACTGTTAAAGTTATAGA TGGATTCATTGATGTTGTTATTTGATGATGCACTTCAGAAATGGTTCATACAAAAGTGAATTCAGAATTTGGCCTGCATTGACCTCTTTTGTAATGGTTT TTTTTAATTACTTATATTTATTTAGATTTTGTGAGCTCGGGCGGTCGAATGTTCGATTCATGGAGTCGATCTCATCAGGTGAGGTGAGATTAAGGTTTGG TTGTTGTCGTATTTACTTATATTTATATAGATTTTGTGAGCTCGGGCGTTCAAATGTTCGATTCATGGAGTCGATCTCATCAGGTGAGGTGAGATTAAGG TTTGGTTGTTGTCGTATTTAGATTTTTGTGATCTCTGGTTTAGTAAATCCTAATCCTGATTAGCATGCACCATCAGCTATTATGACTGTACTATACCCAC ATTCCCACTGTTTATCGAAACACTAAATATTAGTTGTTAATTTAAAATAAAACTATATAAATCTTTTACAATAAAACATTTCTATCATAGTAAATTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_174941; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279114
| Blastp | Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase from Arabidopsis with 64.39% of identity |
|---|---|
| Blastx | Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase from Arabidopsis with 64.39% of identity |
| Eggnog | asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)(ENOG410XQK1) |
| Kegg | Link to kegg annotations (AT5G38460) |
| CantataDB | Link to cantataDB annotations (CNT0001927) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442798.1) |
| Pfam | ALG6, ALG8 glycosyltransferase family (PF03155.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |