Ll_transcript_279119

• Id Trinity: TRINITY_DN50141_c0_g1_i16
• Name Transcript: Ll_transcript_279119
• Sequence: TTACATTCCCGTTTTAAAAAAACCATTCTCTAATGCGTAATATATTTATTATTTTATAAACGATTCCAAAGGGGATAAGCAAATACCTAAACCATTCTCA AAACCCTTGTGAAATTAATCAGAATTCTTCTATCAACCCCAAATGCCAACTCTCATCAACCTCAGAGTCGCTGAAACCCTGGAGAGAGAAGAAGGGATGA TCGTCGATATCAAGGTTAATGGCGCCGTGCTCACAAAGGTCTCAAATGTTCTATAAATTCTGTATCCAGCAACATTGAGTTTTCCGATAGTTTAGAGAGA AGCTCTGATGCGTTTAGGTTTTCAACTAGTGGGAAGGAGAGCTTGGATTTCAATGAATTGAATAATCAACGAGGTTGGGGTTCCACTGAGTCTGTGTTGA GTTTAGAGTATCCATCTACTCGTGTTTCTTCTTCCAAGCATGAGGAGGATTCTGGTAATGAAACGGGTTTTGATGCTAAACGGTTCTCTGTTGTGGCTTC GGATGTGGATGGTTCCGTTGATGATAGCGATGCTTTGAATGAGGATTTTGATGTGGAAGCGGAGGTGGAGAATGTTACTAAACCGGTTAAAAGAGAACCG CTTACGAAGGGAAAGAAAGGGTCTTGCTATCGGTGTTTCAAGGGGAATAGGTTTACAGAGAAGGAGGTTTGTTTGGTTTGTGATGCAAAGTATTGTAGTA GTTGTGTGCTTAGAGCAATGGGGTCCATGCCAGAAGGTAGGAAATGTGTTACTTGCATTGGATTCTCGATTGACGAGTCGAAAAGACAGAACTTAGGGAA GTGCTCTAGGATGCTCAAGCGGTTGCTTAATGATTTGGAGGTTCGACAGATAATGAAGGTGGAGAGGTTTTGTGAAGTGAATCAGCTTCCGCCTGAATAC ATTTATGTTAATGGGAAGTCACTTTGTTATGAGGAGCTGCATACATTGCAGAACTGTCCAAACCCGCCAAAGAAGCTATGTCCAGGAAACTATTGGTATG ATAAAGTTTCTGGTCTCTGGGGGAAGGAAGGACAGAAGCCTTCTAGTATTATCAGTGCCCATTTGAATGTTGGAGGGCCCATCAAACTGGATGCTAGCAA TGGAAACACTCAGGTTTACATTAATGGTCGTGAAATAACAAAAGTAGAGCTTCGGATGTTGCAGCTGGCAGGAGTTCAGTGTGCTGGAAACCCACATTTT TGGGTCAATGAGGATGGTTCATACCAAGAAGAGGGACAGAAGAATACAAGAGGGTATATCTGGGGAAAGCCTGGAACGAAGCTTGTATGCGCTTTTCTGT CCCTGCCAGTGCCTACTAAATCGTCAAATTCTTATGGAGAACAACACTCCAATCTAGTCAACAGAACAGTTCCCGACTACCTCGAGCATGGAATAGTTCA AAAGCTTCTCTTAGTTGGTTGCAGTGGATCTGGAACGAGCACTATCTTCAAGCAGGCCAAGATTCTTTATAAAAGCGTCCCCTTCTCAGAAGAAGAGCAA GAAAATATAAAGTTGACCATTCAGAGCAATGTTTATGCCTATATTGGCATACTCCTCGAGGGCCGTGAGCGATTTGAAGATGAAATTTTAAAGGATTTAA AGACAAGACATTCTTCTGAACTTGATATCACAGGTATTAGTGCATATTCTTCCTCCATTTCACTCCTGTGTAATATTTATTTTATTGAGGTTTGACTGAG CAGGCAAGCTATTTTTATATGGTAGTATGCATCCACTGTACACCATCTAGTTGTCAGTCCAAATGCTAAATGGTTTGCAGCATGCTTATATGTTTGTTTA AGGCATCATTATGGTTCATATTCTGTTTTTATTGCCTCATTCCATTCAAAAGTGTTGTGACTGTTCACATTTATATATTAATTATTGTAGGTTGTATATC TATAAGGACATATTATGTTTTACCTTTATCTTAGCTCTAGTTTAGGCAAGTAAAACCATAATCTATATATTATGTAAAACTCTGTACAGTCTTCTATCAT TCAGTAGTAGCATTATTAAGACTTCTCCATTCAAATAGAAGTAAAAACAAGAAATCCCACTCGTTGAAAATGCTTTGAATATAAAAGGATTGTATATTAT CTTATTTATGCCAAGTGTCAAGTTGGCATAAGTCTCAAGCTAAGTTGTGATAACTAGTATATTTCTTCATTATTTTGGACCACATGAGTGACATGACTGC TGTAGAATATTATTTTCTTTTTAATAGTAGTGGTTATAGAAAATGTGTCCATGTTATCAAGAGGACTTAATATTGTGAGTGATGTACTTATTAAGATTTA AAGACATTACGATATTAATGACAATATATATTCAACTATGTGATGGTCATTGTATACTCTAAGTCTCAAGCTAATGTAGTCAATAGTGCAGTATGTGGCC ACCGCTATCACGTAGGCTCCCTGTGATGTCCAGTTCGCCATGCCACATTTTTTGTGGAGAGGCGAATTATGACCGCTATCAATGTTAATTGCATCTCTCA TGGATGTTATCTGATGCAAGGGAGAAATCCCCATTTTCTTCTTGTTTTTTGCCCTCTCCCATTCTGTGGACATTTAAGTCATTCCCGACTTTCTTTAGGA GATTCTAGTTATTCCCTGCCTTCCATTTTGCCAGAAATCATTTAGGGTCACATACTCATCTTCGACGAGTTAGCCCCCTACCCACTGCAGCTCAACATTC TGGCAACCCACCATTTTTGTGTGCCAAACTCTGCCATTTCTGGCAGCTCCTCCTTATTCCTGCAACTGTGCTGTGCTAAGAGGTCTTTACAACCCCTTTT TGCAGCAACCGTCTTCTTTCCATAGGTCTCTGCTCTGTTCTGTTTTTGGACTCCCTTCTTTTTTATTCTGTTTCTGTCTTACTGTGTACTTAGAAGCCCA CATTGTTTTTTACTTTTGCTTCTGTATTAAGCTTTATTTTTTTCCTTTTATGGTTACTGTGTACTTCACATCCCATGAATATTTTGGCATCATCTTCCAC CATTAGTTCTTTAGTTATGCCTTAGATTGACGGTGATTGTATTGCTACACTCTATATTGTGACTGCTGATTATTGATGATGAGTTTGCCTTACTTTCGAG TTATTTTTTATTATGGAGCATTTATATGGGTGATTGCTGAGTAAGAAGTTGTTTCATGTTTAGCTGTCTCATTTCAGTCATTTGTACTAAAAGATTGACT GGTATAATTATGGTTTACTACAGGAACCAGCTCGAAACTTGATGATAAGACAATATATTCTATTGGCCCAAGGTTGAAAGCATTTTCTGATTGGTTGCTA AAAACTATGGTGTCTGGCAAAATTGATGCTATCTTTCCCGCCGCTACTCGTGAATATGCACCATTAATTGAGGAGTTATGGAATGACACAGCCATGAAGG C
• Tissue: pods
• Gene name: LI_gene_174941;
• Additional information: details;

Expression of Ll_transcript_279119

FPKM

• PAB: 0.8
• PNAB: 0.5
• PS1: 0.1
• PS2: 0.2
• PS3: 0.3
• PW1: 0
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279119

• Blastp: Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 77.59% of identity
• Blastx: Extra-large guanine nucleotide-binding protein 1 from Arabidopsis with 67.86% of identity
• Eggnog: Guanine nucleotide binding protein (G protein) alpha(ENOG410XNVQ)
• Kegg: Link to kegg annotations (AT2G23460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420820.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;