Ll_transcript_280478

• Id Trinity: TRINITY_DN50142_c3_g1_i3
• Name Transcript: Ll_transcript_280478
• Sequence: AAAATAACAAGTATAATTGTCTAGTGCAAAATCTTAACAAGATTTTAACAAAAAAAGGAAAATGGGTTTTGCTTATCTTAGCTTTCCAAGTTTCTTGAGT GCTATGTTCCTTGTGTTATGTGCTGTGTCAATATTGCCACAGATAACACATGCAAAACATGCTAGAGTAACAAGACATTACAAGTTTAATATCAAATTGC AAAATGTTACAAGACTTTGCCAAACAAAGAGCATTGTAACTGTCAATGGACAATTTCCTGGTCCTAGAGTGATAGCAAGAGAAGGCGATCGGCTAGTAAT TAAAGTGGTTAACCATGTTCAGTATAATGTTTCCATTCATTGGCATGGAATTCGGCAACTGAAAAGCGGTTGGGCAGATGGACCTGCATATATCACACAA TGTCCAATTCAGACAGGCCAAAGTTATGTGTACAATTTCACAGTCATAGGCCAAAGAGGAACATTGTGGTGGCATGCACATATTTCTTGGCTTAGAGCAA CACTTTATGGTCCTATTGTAATTCTTCCGAAAAGACATGTCCCTTATCCATTCCCTCAACCTCACAAAGAAGTTCCCATCACATTGGGGGAGTGGTGGAA AGCCGATACGGAAGCGGTAATAAACCAAGCAACACAAACAGGTTCGGCACCAAATACCTCAGATGCTCACACTATCAATGGTCTTCCAGGTCTTCCAGGT CTTCTCTACAACTGCTCTGCCAAAGATACCTTCAAGCTCAAGGTGAAGCCCGGAAAGACGTACCTGCTTCGTCTGATCAATGCTGCACTTAATGATGAGA TGTTCTTTAGCATTGCCAATCACACCCTCACTGTGGTTGAAGCTGATGCTGTGTATGTAAAGCCTTTCAGAACAAACATTGTTCTGATCACACCAGGTCA AACCACTAATGTCCTTCTGAAGACCAAACCCAAGGCTCCAAATGCCACTTTTGTCATAGCTGCAAGGCCTTTTGCTACAGGTCCAGCCACTTTCGACAAC ACCACAACCACGGGCATGCTCGAGTACAAGACAATTTCATCACTAACAAACACTAAATCAAATAGCAAACTTCCTCTCCTTAGACCGGTGCTTCCGAAAT TCAATGACACAGTCTTTGCAGCTAATTTCAACACAAGAATCCGTAGCTTGGCCAACGCGAAATTCCCAGCCAAACTTCCGAAAACCGTAGACAAGCACTT CTTCTTCACAGTTGGCTTAGGACTTAGTACATGCTCAAAAAACCAATCATGCCAAGGGCCTAATAACACAAAGGTAGCAGCTGCAATAAACAATGTATCA TTTGTGATGCCTAACATTGCATTACTCCAATCACATTTCTTCAACAAATCCAAAGGAGTTTACACTACTGATTTCCCTACAAACCCACCTTTCAAATTCA ACTACACTGGCACTGCACCTAGCAACATTATAGTAACAAGTGGAACTAAGGTATTGGTGTTACCTTACAATACAAGTGTTGAGGTTGTCCTTCAAGACAC TAGCATTATAGGAGCTGAAAGTCATCCACTTCACCTTCATGGATTTAACTTCTTTATTGTGGGACAAGGGGTAGGAAACTTTGACCCTAAGAAAGACCCT TCAAAATTCAATCTTGTTGATCCTGCTGAGAGGAACACTGCTAGTGTACCTTCTGGAGGGTGGGTTGCTATTCGTTTCATTGCAGATAACCCTGGAGTTT GGTTTATGCATTGCCACCTTGAAGTGCATACAAGTTGGGGTCTGAAGATGGCATGGATAGTCCAAGATGGAAAACAGCATAATCAGAAGCTTCCACCACC ACCCTTTGATCTTCCCAAATGTTAAGAGATTGGCCCAACATGTTATTTTTTGTAGTTTTGTTCTCATGCTGTTTTTTTAACTTAGTGATATTTTTTGGGT ACTTTGTTCCCAAAAAAAATTGGGCACTTTGATTTTCATGATTGTTTCAGAACCAACTAGGAAAAATTATGAGAGAGTTTTGTTTAGGTTACAGTATTGA ATTATCTATTTGAATGTATGGTCCAAAAAAGTATTATATAGTTGAATGTAATACAGTATTCTTTTGCAAGAAACAATATTTTGAGAAAGCTGAGTATAAT TTTCCAC
• Tissue: pods
• Gene name: LI_gene_174952;
• Additional information: details;

Expression of Ll_transcript_280478

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.4
• PW2: 94.7
• PW3: 68

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280478

• Blastp: Laccase-17 from Arabidopsis with 67.53% of identity
• Blastx: Laccase-17 from Arabidopsis with 67.53% of identity
• Eggnog: Multicopper oxidase(COG2132)
• Kegg: Link to kegg annotations (AT5G60020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450239.1)
• Pfam: Multicopper oxidase (PF07732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;