| Id Trinity | TRINITY_DN50142_c3_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_280479 |
| Sequence | AAAATAACAAGTATAATTGTCTAGTGCAAAATCTTAACAAGATTTTAACAAAAAAAGGAAAATGGGTTTTGCTTATCTTAGCTTTCCAAGTTTCTTGAGT GCTATGTTCCTTGTGTTATGTGCTGTGTCAATATTGCCACAGATAACACATGCAAAACATGCTAGAGTAACAAGACATTACAAGTTTAATATCAAATTGC AAAATGTTACAAGACTTTGCCAAACAAAGAGCATTGTAACTGTCAATGGACAATTTCCTGGTCCTAGAGTGATAGCAAGAGAAGGCGATCGGCTAGTAAT TAAAGTGGTTAACCATGTTCAGTATAATGTTTCCATTCATTGGCATGGAATTCGGCAACTGAAAAGCGGTTGGGCAGATGGACCTGCATATATCACACAA TGTCCAATTCAGACAGGCCAAAGTTATGTGTACAATTTCACAGTCATAGGCCAAAGAGGAACATTGTGGTGGCATGCACATATTTCTTGGCTTAGAGCAA CACTTTATGGTCCTATTGTAATTCTTCCGAAAAGACATGTCCCTTATCCATTCCCTCAACCTCACAAAGAAGTTCCCATCACATTGGGGGAGTGGTGGAA AGCCGATACGGAAGCGGTAATAAACCAAGCAACACAAACAGGTTCGGCACCAAATACCTCAGATGCTCACACTATCAATGGTCTTCCAGGTCTTCCAGGT CTTCTCTACAACTGCTCTGCCAAAGATACCTTCAAGCTCAAGGTGAAGCCCGGAAAGACGTACCTGCTTCGTCTGATCAATGCTGCACTTAATGATGAGA TGTTCTTTAGCATTGCCAATCACACCCTCACTGTGGTTGAAGCTGATGCTGTGTATGTAAAGCCTTTCAGAACAAACATTGTTCTGATCACACCAGGTCA AACCACTAATGTCCTTCTGAAGACCAAACCCAAGGCTCCAAATGCCACTTTTGTCATAGCTGCAAGGCCTTTTGCTACAGGTCCAGCCACTTTCGACAAC ACCACAACCACGGGCATGCTCGAGTACAAGACAATTTCATCACTAACAAACACTAAATCAAATAGCAAACTTCCTCTCCTTAGACCGGTGCTTCCGAAAT TCAATGACACAGTCTTTGCAGCTAATTTCAACACAAGAATCCGTAGCTTGGCCAACGCGAAATTCCCAGCCAAACTTCCGAAAACCGTAGACAAGCACTT CTTCTTCACAGTTGGCTTAGGACTTAGTACATGCTCAAAAAACCAATCATGCCAAGGGCCTAATAACACAAAGGTAGCAGCTGCAATAAACAATGTATCA TTTGTGATGCCTAACATTGCATTACTCCAATCACATTTCTTCAACAAATCCAAAGGAGTTTACACTACTGATTTCCCTACAAACCCACCTTTCAAATTCA ACTACACTGGCACTGCACCTAGCAACATTATAGTAACAAGTGGAACTAAGGTATTGGTGTTACCTTACAATACAAGTGTTGAGGTTGTCCTTCAAGACAC TAGCATTATAGGAGCTGAAAGTCATCCACTTCACCTTCATGGATTTAACTTCTTTATTGTGGGACAAGGGGTAGGAAACTTTGACCCTAAGAAAGACCCT TCAAAATTCAATCTTGTTGATCCTGCTGAGAGGAACACTGCTAGTGTACCTTCTGGAGGGTGGGTTGCTATTCGTTTCATTGCAGATAACCCTGGTGAGT ACTATACTATTAACAAGAGTTTATGTTCATTCTTACTTCATATACTTCTTTCATAATTCACATTGGACTACAAATATTGAAAATTACATGCAAAAATGAT AAGTCCTACTATAAAATAAAATTGGTTTCTTTATCTCATATAACATGACCCTCTTAAGTTACATTTCAGGATTATTATCTATCTTCACTCCAATGTACAT ATATTGGTTGATTTCATATTGTTAATATTATTCGCTTAGCCAAAAACATGAGGAGATACCCTTTGTAGTACAAAAAAAATAACATTATTCAGAAAAAATG TGTACACTGAGAATGTAAAATTTTTTATACTGTATGTATTATTCATATTTAATTAATATTAACTTATAAATACAAGTAATACAAATGAACGGTGGATCAT ATACTACTGATGCATATAAATCTTTATACCTACGTGAATAGATATTACCTCAGAAGCACGGATAAGTGCAACCCCGCGTGTTGGTGTCCGACACGTATCT GACGCGGATACGCTTGGATTCGCGAAAAATACGTATCCGTAGAGTATCCAAAAATTAAAAAAATAAAATAAAATAAATAAATATCAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_174952; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280479
| Blastp | Laccase-17 from Arabidopsis with 66.3% of identity |
|---|---|
| Blastx | Laccase-17 from Arabidopsis with 66.3% of identity |
| Eggnog | Multicopper oxidase(COG2132) |
| Kegg | Link to kegg annotations (AT5G60020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450239.1) |
| Pfam | Multicopper oxidase (PF07732.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |