Ll_transcript_279370

• Id Trinity: TRINITY_DN50146_c2_g1_i5
• Name Transcript: Ll_transcript_279370
• Sequence: CGATACAGGAGACTTGATGGTAGGATGACTCTACTTGCAAGGGACAAAGCTGTTAAGGATTTTAATACCGATCCTGAGGTAACCGTTATGCTGATGTCAC TGAAAGCAGGCAATCTTGGGTTGAATATGGTTGCTGCATGCCAGGTTATTCTTTTGGATCTTTGGTGGAATCCAACAACTGAGGATCAAGCTGTTGATCG AGCTCATAGAATTGGACAGACTCGTCCTGTCACTGTAACACGGCTCACTATAAAAGATACAGTTGAAGATAGAATACTGGCTCTTCAGGAAGAAAAGAGA AAGATGGTTGCATCTGCTTTTGGTGAAGACCATGCTGGCGGTACAGCTACCCGCCTTACAGTGGATGATCTCAAATATCTTTTTATGGTCTAGAAAGTTT TCTGATTACTATGATGATAGTCTCTTCAAGTTTTGTTCTAGATGGTTTAGGTATATGGAGTTAGGGTGGTTGTTCAGTTAAAGAGTGCCTGCTGACATGT GCTGTTCAAGTTGGCTGGTTGATTCAAGTAGTAACATCTATTTTGGAGCCCATCATGGCCATTTTTGTCCTCAGAACATTGATACTATTGCTATGCTTTG GTATGTAGCAGCATAAAATTTCATGTAAATATTCTAATTATATTTACATTGGTTATGAATATACTACCTTATGCTATTTTAACTGTCCTTTTCTTTTAAT CTTTTCCATCTTAAACTAACTTGCATGGAAAGCAAGGATGTATGTTGTCATGTTGCAAAGAATCCTGAAGGCACCTATCTAGCTAGCTTCTATGGTTTTA AGAGTTAATAATGATTAAAAATAAATGGTAGATTATGTAATGACAATGTAAATATCTGTTACATTGTGAGTGCATGCTTCTTTTTCTTAGTTTTTTTTAT CTTTGATGTGGG
• Tissue: pods
• Gene name: LI_gene_174989;
• Additional information: details;

Expression of Ll_transcript_279370

FPKM

• PAB: 3.4
• PNAB: 5
• PS1: 5
• PS2: 6.1
• PS3: 7.4
• PW1: 3.9
• PW2: 4.5
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279370

• Blastp: Helicase-like transcription factor CHR28 from Arabidopsis with 85.27% of identity
• Blastx: Helicase-like transcription factor CHR28 from Arabidopsis with 85.27% of identity
• Eggnog: Transcription termination factor, RNA polymerase II(ENOG410XPDU)
• Kegg: Link to kegg annotations (AT1G50410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452595.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;