Ll_transcript_279371

• Id Trinity: TRINITY_DN50146_c2_g2_i4
• Name Transcript: Ll_transcript_279371
• Sequence: TTGATTTTTCACGGGAGGAACGTGATTTCTATTCCAGACTAGAGGCTGATTCACGTGCACAGTTTCAGGAATATGCCAATGCTGGAACTGTCAAACAAAA TTACGTCAATATTTTGCTTATGCTTCTGCGCCTTAGACAAGCTTGTGATCACCCTCTGCTTGTCAAGCATTACAATTCCAACTCTCTATGGAGATCTTCG GCTGAGTTGGCAAAGAAGATTCCTCAGGAAAAACAAATATCACTTCTGAAATGTTTAGAGGCTTCATTAGCCCTCTGTGGCATCTGTAATGATCCTCCTG AAGATGCTGTTGTTTCTGTCTGTGGCCATGTTTTCTGCAACCAGTGCATTTGTGAACATTTTAACGGCGATGACAATCAGTGCCCCACTACAAATTGCAA AACTGGACTAAACACGTCTAAGGTGTTTTCAAAAGATACATTGAAAAGTTGTCTTTCTGAGCAGGGCTGTGATAATTTGCCTGGTTTCTCTGGTTCTGAA GTTGAGGAGTCTGAGCCATGGTTTCAGACTCAGCCATATGATTCTTCGAAGATTAAGGCTGCACTTGTGGTGTTGCAGTCATTGTGTAAGCCACAAAGCT ATACATCAAAAAGTGTTTCTGTACATAGCACTGTCGGGGGAAATAGTGACTGCTCTTCTGATTCTAGCAAAGAGAAATCCTTCAAGAACTTTCCCGAGGA TCACAATTTGTCTGGTAATAGAAGCTCTAATGATTCAGTTACCGCTGTAGGGGAGAAGGCAATAGTGTTTTCTCAGTGGTCGAGGATGCTAGATTTGCTT GAAGAACATCTTAAGAAATCTTCAATTCAGTATAGAAGGCTTGACGGAACAATGTCAGTTGCTGCAAGAGATAAGGCTGTTAAAGACTTTAACACTCTCC CTGAGGTATCAGTTATGATCATGTCATTGAAGGCTGCCAGTCTTGGTCTAAATATGGTTGCAGCATGCCATGTTCTTATGCTAGATTTATGGTGGAATCC TACAACTGAAGATCAAGCAATAGATAGAGCACATCGAATTGGGCAGACTCGTCCCGTGACTGTTTTGCGGTTAACTGTGAGAGATACAGTTGAAGATCGT ATTTTAGCTCTACAGGTATCTTTTCTGTTCCAGATAAAGTTACTTGTTATATTGTCATGGATGTGATTTATATTATAAGTGTTAGTGGCGTAATGTTGTC TGAACTTACTAGTTATGGTCCTGATATTTGAAAATGTTTCTATGCTTTATTGACTTAAAGAGGTTAGAGTACTTCAGAACAGTCCATTATCTGCATTAAA ATGTTTAGATCACTATTAGTTCATCCATGATGGCTTTTGGGTTATAAAGTTGTTGAAATATATTATCCTTTTAGCCTTTTCTGGACCTTTCACTTATTGT GCGCTGAATAACCTGTGTGATTGATTGTATGCAAAACTAGTTGTAACATGGAAAAAAATGATGGGTACAATAGAATTGCCTTCACATGTCTGATAAGCTG TTTTGAAAGTGTTATGCATCTGCCAGCCTTGAAATGCTTGTTCACTCCAAGTGTTTCCACTAAATTTTACTGTGAAAAATCTAGAACGTGTTATATGATA TGTGTAGCGGTTGCTCATTCAAGAAAATTTGTTACATAAAATTTTGCAGCAAAGGAAGCGAAAGATGGTTGCTTCTGCATTTGGGGAGAATCGAAATGGT GGTACTCAGAGTCGCCTTACAGTGGATGATTTAAAATACTTATTCATGATGTGATCAGACATAATCAGAAAACACACAAAACAAATGTTTGAAAGTAGTT ACAAGACCTTATTTATGGACATTTGACATGAAGATTACATTATGTGAAATGTCCTTATAGTTAGAAAGATTCATTCTTTAACATTGAAATTGTGGCTTAG TCTCTCACTTTTGTATAGGATGTAGAGAGCAGTAGCATAGATAGCAGCATAGATTTTGCTGATTGTTCTTCTCATTGTAAATGATATAGAGGCTTTGCCT AACCATTTTTATCTGTTGTTTCTCTTTCATATTCATTTCGATATTTAGACAATGTCATAGTTGCTGCATGGTTCTGTAACTCCAAAGTTATTCATCACAC AGTGGACGATTATGTAATATACTATATTTATGCATTCACCATTCATTGTATT
• Tissue: pods
• Gene name: LI_gene_174990;
• Additional information: details;

Expression of Ll_transcript_279371

FPKM

• PAB: 0.7
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.6
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279371

• Blastp: Helicase-like transcription factor CHR28 from Arabidopsis with 53.91% of identity
• Blastx: Helicase-like transcription factor CHR28 from Arabidopsis with 53.91% of identity
• Eggnog: Transcription termination factor, RNA polymerase II(ENOG410XPDU)
• Kegg: Link to kegg annotations (AT1G50410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445638.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF00097.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;