Ll_transcript_280199

• Id Trinity: TRINITY_DN50147_c1_g1_i3
• Name Transcript: Ll_transcript_280199
• Sequence: CAACACCTTGATAGTAATTTATTATATTGAAACAATTGAGTAGGATGGATTTGAGAAAGTAATGCAGGTGAAGGAAAAGTAGAAGAAGAGTAAACTCTAA TACAAGTCCTTGCAAAAAAAGAGAAGAGAGGTGTGGTGCAGGAGTGGAACAGAAAAACAAAAAACAAAAAATGAAGAAAGCATCAGGAGGCGGAGCAGAG AAGAAAAGGGTGCGACGCTCCTCCGCACCAGATCCCAACTCCGACGCCCCTCCCAGAAAACAAGCTGCCAAGAAAGATGTGTTCCAGGTGTTTGCTGAGA AGGTGAGAGATAATAAGGATTTGGTTTCTAGATGGGCTGTTCTACAGGAGACGCGTGTTGAATATTTTAGAGGGAAGGATTTTGTGAACTTCATTAAAAA TCACCCAGAGGTCAAAGATGTTCTAGAATCAGATAGGAATTTAGAAACAGAAGAGATTGCCAACATTCTACTTGGAAGAAGTCTGTTAGTGCGCTGTGAT CGTGTGGTCAAAACTGTGCGTCCTGGGAAGAAAAAGTTATCTACTTGGCCTGCACATTTAGAAATTTTCCCTGAACAAGTATTTTCTGAAAATGATGCTT TCTTTGCTTGGACATTTGTGAAGCGCCATCCACTTTGGCAGACACTCCTCTCATTTTTCTGGCCTGTCTTAACATTGGCTATATGCTTATTTCCTGTATA TCCTCATCGCTGCAAACTATTAATACTTTACTCATGTGCTGGGGTCCTCTTTCTCATTCTCTCACTGCTTTTGATACGCGGGACAATATTTGGGATTTTG TATATCCTTCTTGGAAAACGGGTCTGGTTTTTCCCTAACATCCTTGCTGAGGAAGCAACACTGGGGGAGTTGTTCAGATTTTGGCCTAAGAAAGATGAAG AGGAAAGACCCACATGGACAAAAAGACTTTTTTATACTCTAGTGGCTATGCTGGTCATATTATTGTTGAGGCATCATGCACCTGATGAAGCTGCCAGAGC AAGGTACCAGAAGAGGGTGTCTAACATCATAGATGATGTTCTTGAATGGTCTCCTACTTTAGCCTTGTCAGGGATGATGGATAAACAGCAAAATGTGGCT AATGCCACAGGATCTGCCGATGCTGCACCACATGCGCGCAAAACAGACCCAGAGCATGAATCTCCACCTTCTGGTGATGATGCAAAATCTTTCACTGAAC AGTATGATATCAAAGAAGTCAGTGATAATGTAGAGGATGCAGGTGAAGAAGATAAACATCATGATTAAAAGTCAATCATATAGCTAAACTAAAAATCTAT AGTGACTAGATCACAATTTTCCTTTTATTATTAGGGGTGTAAAAGTACCATGTATGAAATAACACAGTAAAAATGGCCCTTTTCAAATATATGCTTTTAA AGGATTATGTTTTTCTTCCTTTATGTGCCTTTTCAATGGGATTGACAAGCTGATCTCACATTATTTTACTTTCGGAATAATATATCTCCTCATACTGAGA TAATTTATCTCCTTCAGCCAGTAAAAGTATGAC
• Tissue: pods
• Gene name: LI_gene_174997;
• Additional information: details;

Expression of Ll_transcript_280199

FPKM

• PAB: 12
• PNAB: 10.9
• PS1: 13.9
• PS2: 14.9
• PS3: 17.1
• PW1: 14.7
• PW2: 13.6
• PW3: 16.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280199

• Blastp: Translocation protein sec62 from Schizosaccharomyces with 27.1% of identity
• Blastx: Translocation protein sec62 from Schizosaccharomyces with 27.55% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC17G6.09)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430866.1)
• Pfam: Translocation protein Sec62 (PF03839.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;