Ll_transcript_279223

• Id Trinity: TRINITY_DN50150_c0_g2_i7
• Name Transcript: Ll_transcript_279223
• Sequence: TTGGCAAGTGGTCAAAATCTTACCACAGGAGATAGTGATGATATGTGTGCAATATGTGGAGATGGAGGGGATTTGATTCTTTGCAATGGATGTCCTAGGG CTTTTCATGCAGCCTGCTTGGGTTTTGATTGTGCTCCAGAAAGTAGTTGGCATTGTCTAAACTGTAGAGATAATGTTGGTAATGGAAGAGAATCTTCTAT GGCGAGGCCAATCATGATACGGTTGACACAAGTCGATAAAGCTCCAGAGTTTGAAATGGGGGGATGTATTGTTTGCAGGCAACATGATTTCAGCGTTGCT AAATTTGATGAGCGAACAGTAATAATTTGTGACCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGGGACATAGGACTATGTGAATTGGAAGAGCTGC CTAAGGATAAATGGTTTTGTTGTGAAGACTGCAATCGAATATATGTGGCTCTTCAGAATTCAGTTTCTGCTGGAGCAGACATTATACCAACTTCCTTGTC AGAACTAATAATCAAGAAGCATGAGGAGAGGGGATTATGTACCTATGAAGGCATGAGTGACATCCAGTGGAGAATTTTAAGGGGGAAGAGTCGTTGTGCA GAGCATTTACCTATACTTTCACGTGCTGCTGAAATTTTTCGAGTGAGTATTTCTGGTTTCTAAGTATGTTAATTGTGATACTTGACTTTTTGTGTTATAT GTGGTTGATATGTTTCCTTATTGGTTCATGTTTCATTGGTCCTGTTATCTGCTCCTAGTATAGCTTGATGGAATAGTTGTAAGGGACTCATGTCTATTTG TTTTTGTGCACACAATTCAAATTTGGAAAGTTACATATTAGATATAAAATTTAGGTTTATTATAAATTATAAATTCTATAATATTGACGACAACTTGGTT ATTAGCTATGGGTTTTAAGATGATAACATTTTCATTGTCATATAGGGTACTGTCTCTGTTGTGTTCTCATTGTATCTATTTGTCTAAGCCACGACAGAAA AGTACCCTCATACATAAAAATCTTTTCTCTTGGGTTTTCCTACATGATAAGAATCATGTACTATATGAGTATGTTTAGGATCAAAATTTTGAGGAATTGT CTCATATAGATGAAACCCCGTATTTGGGAAGTTATAAAATATGAATTGGTTTGACTTTGAAGCCTTTTTTTTTATATATGTTCCAATATTTGGTTTATGA AAAATGCATTGGTGTCACTTGGTCTATGTAATCCACCCCATCTTGTCGGAAAAGGCTTTGATAGTTGGGTTTTTTGGTATAACCTAGGATATCCTCTCGC CTTATGGGTAAAGAGTTAATCCCTTTGGTTGTTGGTTTAGTTGTATACAAACAGAAAGCTACTCAGGTTTGGTTGGATTTGAGTGGCTTTTCGTTTTAAT TGCTGAAATAATAGGTCTAACATTTTTTACCTTATTACCGAAGTTATTAGTTCCATTATTTGACCTATATTGAGTAAGGGTAATAAAGTAAGTTATCAAT CACTAATTACTACTATAAACCAATTTCAATCATTTTTAATGTGTTCCAAACATGGATTGATGTGTAAGAAATGAAATCCCATTTTTATAATTTATAATAG GTTCTAAACAAGGGAATTGATTTCTATATGAAATCATTTCAAATTTTAATGATTCCAAACACAACTTATTGGTTGTCGTGCTTGTTAAGAGACTGGTGCA CATTATTCCTCTGGATGCAACTAAGTTGGGAAACTAGGAGAAGAGCTCCTCTTTTTCTAGCAGGTTATGGACATGTTTTAGCTTTTTAGACTTTTGACTG TTGTCAATTAAATGCAGTCATGCATTTTGAAAATGCCTGTAGTTCTTTCATTACTGCCTTTCTTGATCTACCCG
• Tissue: pods
• Gene name: LI_gene_175021;
• Additional information: details;

Expression of Ll_transcript_279223

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279223

• Blastp: Chromodomain-helicase-DNA-binding protein 4 from Mus with 32.41% of identity
• Blastx: Chromodomain-helicase-DNA-binding protein 4 from Mus with 32.41% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (107932)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428224.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;