Id Trinity | TRINITY_DN50155_c0_g1_i1 |
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Name Transcript | Ll_transcript_278857 |
Sequence | CTTCTTATTACTCTTATTTCTTATGCTCCTCACTCTCTGTGTTTCTCCTTCCTCTATATATTTTATATATTTGCTACAATCACATTATATTCTATCACTT CTTATCTAAATAACTCTTTCAGATTTCTTGTTATCATTCAGGTAGCTGATCCTGCTCACTCTACCCTGCTCAAGTTTCTCTTTCTTCGATCGTCTGAACC ATATTGTGGGTTCATCAGATCGTGGATTTTCAAGGCAGAAATCTATGACCCATATAATGAGTTTATTGTAGAAAGTATGGACTCTCTATCTCCCAAGTCA TGTGACGTTAAATATGGCATTTCTCTTGACCTACAATTCGCAAGCACCAGGGTACGAGATGGAGTTTCCATTCCTGCATTTCTTAAAGACTACTTGGTTC CATTTGTAAGAGCTGGTCAGCAGCTTCAAGTGCTCTTGAAATTGCTTGGACTGTGCATCCATGTTCCCGGAGACCATAGTTCAGATGACTTCCTTCCCTG CTGGAGTGGTTTTTCAAGCAATAATCCATCTCATTCTTCTCCATTGACTTTCAGCAGAGATATTATAGCAGCTATGGTGGTTGCAAGAGAGAGTTACTAT AAAAGGATGAATGATAAAATTGAAAGCCTTTTAAGTAGTTTAGAAGTTAGATATCAACAGGTTACACATGATTCAATACCTTCTTTTGATAATGGTGGAG GGGCTTTGGACAATCTTGATCAGTTCATCTCAGAAGACAAATCCATTGTTCGTCCAACAGAAGATAAAGCAAGTTCAAATATGGGCACTGATGGTTTGGG ATCTGATGTCTCAAGTACAGTAGATGATTTCTCTTTGCTGGAAGATATGTATGATTCATCTGAAAGTTCATCCTTGAGTAGCTCTGAGGAGCAATTGGAG TCTGATCTGCTTAGTGGGTGGCCTTGTCCATTAGCTGTGCAACAAAACCCTTTACCTGGATTATGCTTTAGTAAGAGTAGAACCTTACATAGTTCAATAA AAAATTCCCCTCGTCATGAAAAGTCAGGGAGTGATTTGCTTAGAAACTTTGATAAGATCGAGCCCAGTGATAATTTGGTGATGTCCTGCCACAAGGAAAT GATATCAAGTAACATGTCCATTCCTCTAAATCGTGAGGAATCGAGCTCTTCATGTATATTCAGCGTTCAATACAGAGAAAGTTTGACTGATAGTTTTTCG GCAATGAGCCACCTATTGAAAAACTCATTTCTTGATGATGAATCTATTGGAAAAAAAGTGAATGAAAAGCACCTGGGATCCCTAAGATATTCCATGTCAT CCCAAGATATTCTTGCCATTAGTGATACGTTGAGAGGGGAAGTAATGAGTGAGGATCAACCAGATAACAGTACACTTGCTTCAAATTGGTATACTTTTCA ACCACAAAGATTTGACCATCAGTGTAATATTCCTAGCATTAATCCCCTTAGTATGAACCCAATGTTGACAAGAAACGCATTACTTCACCAGATAGGTAGG AATCGAGAAAAAGGTAAAGCAGATCATGAACAACCATTGCCTTACTTCAACTTTTCTATGGTGGAAGACCCTTGTAAGGTTTATCTGGACAAGTCACCCA CCAACTCAAGATGTAGAGGTGCATCTTCATTTTCACTTGACAGTAGTGCGTCTACTCACGGGAGTAAGAATAATCAATGTGGCAAATTGGGCCATGGTAC AGAGGATGGGTTGGTTGATGTTACCGAGAAATGTTTTGTTGCTTCATCAGATTCGAAGGACCATAAACAAGATGTTTCTACAGCTGTATCCGGTGGGAGC AGCTGGGAAAGATTGCTTGGTAGTTTTAGGGAAACCGTCAATTGTGATGCTACCCACAAGCAGAGTTTGGTGTCAACATTTGAGATACCACTGGATATTA TAATAGACAAATGCTTATTGCAGGAAATTATGCTTCAATATAAATATGTCAGCAAGCTAATTATCAATGTTCTTGAGGAAGCATTTCAGTTGAAAGAGCA TCTTTTGGCACTGCGACGATATCATTTTATGGAGTTAGCAGATTGGGCAGATTTGTTTATCTTATCTCTCTGGCATCATAACTGGTCTGTTACTGAAGCA AACGAGAGACTTTCAGAAATTCAAGGTCTACTTGAGTTGTCAATACAGAAATCTTCTTGTGAACAAGACCCTAATAAGGAAAGGTTGTTTGTGTACATGA AAGGAAATGGGAAATTGCCTCTTTCCACATCTGCTATCGGGGTCCGTTCTTTTGAATTCCTAGGACTGGGTTACCGTCTGGATTGGCCACTCAGTATTGT TTTAACGCCTGCTGCATTAAAAATATATGCTGATATATTCAGCTTTTTAATACAAGTGAAGCTTGCAATTTTTTCATTGACAGATGTATGGTGCTCATTA AAGGATTTGGTGCATACAACTGATAAGTATCTGAATTCTGAACTGCAGCAGCGTGAGGCTGGGCACCTTAATATGTTGATGAAGATGAGGCACCAGATCA ACCATTTTGTATCTACTTTGCAGCAGTATGTAGAGTCACACTTATCTCATGTGTCATGGTGCAGGTTTCTTCATTCCCTTCAGTATAAGGTTTGAAGTCA AATGTTTCTTTTTTGAAATTCTGACCCCTGTTTATACTAGGAATTAAGCTTGACACTAACCTCTATTAGATTACCATGACCCCACAATATAATTTTAAAA TAATCCGACATATTCCTGAACAAATAGAAGCTTAATAAATTTGTATAGAACTCTTAAGATTGCTTCCTCAATTACAGTACTAAATGATTACACAATTGCA TTATAAAAAGCGAACTCAGTAAATTTGGATGGTCATTTTTTCTACCTCACTCATTTGTCATTTTCATAGCTCCTAGTTTATAGTAACCTAGGTAAAACCT GTATGACTTTGTAATTCAGTTTTCATATGATTGTTTTGGATCTTTCGGTCATTCATGCAGGTGAAAGATATGATGGATCTCGAGTCAGTGCACATGGAAT ATCTCGCTGATTCGTTATGCATATGTTTCTTGTCTGATGAAACAA BLAST |
Tissue | pods |
Gene name | LI_gene_175064; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278857
Blastp | Gamma-tubulin complex component 6 from Mus with 27.19% of identity |
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Blastx | Gamma-tubulin complex component 6 from Mus with 27.19% of identity |
Eggnog | Tubulin, gamma complex associated protein(ENOG410XQ5B) |
Kegg | Link to kegg annotations (328580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423114.1) |
Pfam | Spc97 / Spc98 family (PF04130.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |