| Id Trinity | TRINITY_DN50156_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_279918 |
| Sequence | CACACATGCCAGGTTGTGCTCTCTGTCTCCAAGGCTATATAATAACAACAATCAGCATCCTTCAAAACGACCATTGAAAAATCTCTACCCTTCTATAACG AAAGAAGCAGATTCTTTCAACAAATAGCTTTTAGTTTTCTTTCACTTAATCAGCTTTTAGTTTTTCAAATTCTCGTTTTACCCAGACAGACCATAACGAA TCATGAAAACCAGCTTAAGTCACCGACGCGACGAAGAAGCAAGCACAGCAACACCACCAGCACCACCATCACCACCGTATTCTCCAAAACCACCGAAACC AAACAGATCCATCAACTACCTCTTACGAGAACAACGTCTTCTCTTCACCATCGTCGGAATCATAATCGGTTCCACATTCTTCATCATCCAACCCACACTC ACTCGTCTTTCAACTTCCGAGCCACAACCTTATATCAACTCTAGATCCAACGCATACAGCCTTCGCCGCAACGACGTCGCAGTGCACGGAGTTCCGAGGC GCGTTCCCGTCGGAATCGCTAGTCGGCGGTTGAGAGTCGTGGTTACCGGTGGAGCCGGTTTCGTAGGTAGTCATCTTGTTGATAAGCTTATTGGTCGAGG GAATGATGTTATCGTGATTGATAATTTCTTTACCGGAAGAAAAGAGAATTTGATTCATTTGTTTGGGAACCCGAGGTTTGAGCTTATTAGGCACGATGTG GTGGAACCGATTCTTCTAGAAGTGGATCAGATCTATCACTTGGCTTGTCCTGCTTCTCCGGTTCATTATAAGTACAATCCCGTTAAGACTATAAAGACAA ATGTGATGGGTACACTAAACATGCTGGGACTTGCAAAGAGAACTGGAGCTAGGTTTCTGCTAACTAGTACTAGCGAGGTTTATGGTGATCCGTTGGAGCA TCCCCAGAAAGAGACTTACTGGGGGAACGTGAACCCAATAGGTGAGAGGAGTTGTTATGATGAAGGAAAGCGAACTGCGGAAACCTTGACCATGGATTAT CATCGAGGTGCTGGCGTTGAGGTTCGTATTGCTCGAATTTTCAACACATATGGGCCTCGCATGTGTTTAGATGATGGGCGAGTTGTTAGCAACTTTGTGG CACAGGCTATTCGGAAACAACCATTGACTGTATATGGTGATGGAAAGCAAACAAGAAGCTTCCAATATGTCTCTGATTTGGTAAATATGATTTTTATTTT TTGGGTTTTGTATTATTAAATAGCTCTAAATCTTTTCTTCATGCTGCAAGTTAACATGTTACTTGGAGAAATCATCTAAAGCTCATCAACATAAGCCAGA AGTTTTGGGTTAACTGAGAGGCTGATGAATGTGATTGAAAGTCTAAATACAATGAGTACTAGAATAGAGTATTATGGATGGGAGAAATTTTAGCTTAAAA TATATAACTTCAAGTTTTCTACAAGCGCATAACTGTCTCGTGGACCTTATTCTTTGCACAGTAACTTTTATATTTGCTTAAATCATAGGATCACTAAATG TAAATGGACTTCTAGGAGTAATAGAGGATACATTTAAGCCAAATAGAAACAACTGATTAGAAGGGTTGAATGATTTTTTTGTCATCACTTGTAATTCAAG TTAGCTATTGTATGAAAGTAATACTATAAGCTATAAGCCATTAGGAGTGGGCTAATAGCAGGTCATAGTTTCAAAACCTCTGTCATACTGCTGTATCAAA AAACTAGTTTGTATTAAATTCCAGATTTAGAAGATTTTGATTTGGATATGTTGAAATCAAAAAATCATTTGTGGTCTACACTTTTTTTAGAACCTGTGGA GCATTGTAAGGATGCAATGGTGTACTTAAAATTCTTATTCAATTTCACAGGTTAATGGATTGACGGCTTTGATGGATGGTGAACATATCGGACCTTTTAA CCTGGGTAACCCAGGGGAGTTTACCATGTTAGAGCTTGCTAAGATTGTAAAAGAAACAATTGATTCAAGTGCTACAATAGCATACAAACCAAATACTGCT GATGATCCACACATGAGGAAGCCAGATATTAGTAAAGCAAAGGAACTACTGAACTGGGAGCCAAAGATCCCACTCAGAGAAGGATTGCCTCTTATGGTTA GTGATTTCCGGAATCGGATTTTGAATGAGGATGAAGGAAAAGGGTTGAAATAAGAAATTGTTTATGGAGGTTTCTCCTCCTCACACACACTAATCATCAA AAAGCTCGGGTAATAGGTCATTTTTGTCAGAAGATATGTCTACTGTCTATTAACATTTATGCTTTGTTAGCACACAATTGACGTATTTGTCAAAATTTGG CAATTCTTTTCAGCTGTTTTCTTCTGTATTTTATTTTTTTATGTTAAACATGTAGTACACTGTTTCATTTTGGTATCAAGGAGGGAATGAAAATTTTTGC GGTTTCATTGAATATTAAGGTTGTTGATGTGTTATTTGATTTATATGTCATGTAGTTGATGTGGATTAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175077; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279918
| Blastp | UDP-glucuronic acid decarboxylase 1 from Arabidopsis with 77.29% of identity |
|---|---|
| Blastx | UDP-glucuronic acid decarboxylase 1 from Arabidopsis with 70.74% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT3G53520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436844.1) |
| Pfam | RmlD substrate binding domain (PF04321.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |