Ll_transcript_279921

• Id Trinity: TRINITY_DN50156_c2_g1_i3
• Name Transcript: Ll_transcript_279921
• Sequence: CACACATGCCAGGTTGTGCTCTCTGTCTCCAAGGCTATATAATAACAACAATCAGCATCCTTCAAAACGACCATTGAAAAATCTCTACCCTTCTATAACG AAAGAAGCAGATTCTTTCAACAAATAGCTTTTAGTTTTCTTTCACTTAATCAGCTTTTAGTTTTTCAAATTCTCGTTTTACCCAGACAGACCATAACGAA TCATGAAAACCAGCTTAAGTCACCGACGCGACGAAGAAGCAAGCACAGCAACACCACCAGCACCACCATCACCACCGTATTCTCCAAAACCACCGAAACC AAACAGATCCATCAACTACCTCTTACGAGAACAACGTCTTCTCTTCACCATCGTCGGAATCATAATCGGTTCCACATTCTTCATCATCCAACCCACACTC ACTCGTCTTTCAACTTCCGAGCCACAACCTTATATCAACTCTAGATCCAACGCATACAGCCTTCGCCGCAACGACGTCGCAGTGCACGGAGTTCCGAGGC GCGTTCCCGTCGGAATCGCTAGTCGGCGGTTGAGAGTCGTGGTTACCGGTGGAGCCGGTTTCGTAGGTAGTCATCTTGTTGATAAGCTTATTGGTCGAGG GAATGATGTTATCGTGATTGATAATTTCTTTACCGGAAGAAAAGAGAATTTGATTCATTTGTTTGGGAACCCGAGGTTTGAGCTTATTAGGCACGATGTG GTGGAACCGATTCTTCTAGAAGTGGATCAGATCTATCACTTGGCTTGTCCTGCTTCTCCGGTTCATTATAAGTACAATCCCGTTAAGACTATAAAGACAA ATGTGATGGGTACACTAAACATGCTGGGACTTGCAAAGAGAACTGGAGCTAGGTTTCTGCTAACTAGTACTAGCGAGGTTTATGGTGATCCGTTGGAGCA TCCCCAGAAAGAGACTTACTGGGGGAACGTGAACCCAATAGGTGAGAGGAGTTGTTATGATGAAGGAAAGCGAACTGCGGAAACCTTGACCATGGATTAT CATCGAGGTGCTGGCGTTGAGGTTCGTATTGCTCGAATTTTCAACACATATGGGCCTCGCATGTGTTTAGATGATGGGCGAGTTGTTAGCAACTTTGTGG CACAGGCTATTCGGAAACAACCATTGACTGTATATGGTGATGGAAAGCAAACAAGAAGCTTCCAATATGTCTCTGATTTGGTTAATGGATTGACGGCTTT GATGGATGGTGAACATATCGGACCTTTTAACCTGGGTAACCCAGGGGAGTTTACCATGTTAGAGCTTGCTAAGGTATTTGTTTCCTTTCGAAAAGTCATA TTGCTTCAGTGTCTTGTTTTGGTTGAGTTATGTTTTTTCCTTATAAGACTCTGGTCAGATCTTGCTTGACATGCCTTATTCATTAATCCTTGGCCTTTAC ATATTGCATATTAAGTGTGGACTTCTGCAATAAAGACAAACTTCCTTATAGATTTTGGTGTTTAGTGAGAATGGACTGTATCAAAGTTATTATTTTATGA GCATTTTCCTCTTTTCTTAAATATGCAGATTGTAAAAGAAACAATTGATTCAAGTGCTACAATAGCATACAAACCAAATACTGCTGATGATCCACACATG AGGAAGCCAGATATTAGTAAAGCAAAGGAACTACTGAACTGGGAGCCAAAGATCCCACTCAGAGAAGGATTGCCTCTTATGGTTAGTGATTTCCGGAATC GGATTTTGAATGAGGATGAAGGAAAAGGGTTGAAATAAGAAATTGTTTATGGAGGTTTCTCCTCCTCACACACACTAATCATCAAAAAGCTCGGGTAATA GGTCATTTTTGTCAGAAGATATGTCTACTGTCTATTAACATTTATGCTTTGTTAGCACACAATTGACGTATTTGTCAAAATTTGGCAATTCTTTTCAGCT GTTTTCTTCTGTATTTTATTTTTTTATGTTAAACATGTAGTACACTGTTTCATTTTGGTATCAAGGAGGGAATGAAAATTTTTGCGGTTTCATTGAATAT TAAGGTTGTTGATGTGTTATTTGATTTATATGTCATGTAGTTGATGTGGATTAGAA
• Tissue: pods
• Gene name: LI_gene_175077;
• Additional information: details;

Expression of Ll_transcript_279921

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0
• PW1: 0.4
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279921

• Blastp: UDP-glucuronic acid decarboxylase 1 from Arabidopsis with 77.3% of identity
• Blastx: UDP-glucuronic acid decarboxylase 1 from Arabidopsis with 76.78% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT3G53520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436844.1)
• Pfam: RmlD substrate binding domain (PF04321.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;