Ll_transcript_280172

• Id Trinity: TRINITY_DN50157_c2_g3_i1
• Name Transcript: Ll_transcript_280172
• Sequence: CTCAACAACTGCAGCTTTCTGCTGCTGGAATCGCCTTTTCCTTCCAACCCACGCATTCATTTACGAGCAAAATGATAAAAGGCAATGGTTTCTCCTCACG TAAGCAATGACTCTAGTATCATATCAAGTTATCAACACTTCTTGCAACTATCTGGTAGATATATCGCATTAACTTTCACCTATATGTTTAACTACGATGG TATCAGCTACACTTAATTTTGTAAATATTTATTAATATGTGTGTGTATTTATGTAGATTTCAAGTGTCAGTTTCATGATTAAAATCTTAAACATATAAGT AAACCAGTGTCATAGACTTGTAATTTGCATACATAAGATCTAGACAAGATTCAAGGTCCATCATCATATACACAAGGGAGAACTACATACAATGAGTACC CTCATAATAGCTATTTAGTCTCCATTAATTAATATGTTCATATGTTTCTATGTACATAAGTCTCACAGCATAAAGAGCCATCAATACTTTGATGTGGTTC ACTGATGCCTATCACTGTGATCCTTGAGCAATTCAACCACCCTTCTCATTGAGGGTCTCTTAAGGGGAAGCAGTGAGGTGCAAAGTAGAGCCCCAGTTAG AACTTTCTCAACCTCATCATAATCACTGGTTTCCAGGTTCAATCTTGGGTCTACTATCTTGGACAAATTAAAATGGTGACCTTCAATTTTGTCACTTTCT TCTTCAGAACAAGTTATAGCTGTCTCAGTGACCCACTTCACTATATCCTTGTTCTCTCCAAAGGAAGGGTCATTTGACCTCTTGCCGGTTATCAATTCCA TAAGCACCACACCAAAACTATAAACATCACTTTTCTCATTCACTTTCATTGTATAAGCATACTCTGCAATTGAATCCATTAGGTAGGTATTAGCAATCAA ATTAATCAGTCATCATAGTTAACTTTAGATCTCTACACAAATTCACACCCATTCCAACCAATCAAGGTTACAACTTACAGGTTCTATCTAATTTAGAAAT GACAAATACAAAAGTAAATTCCATGTGTTTCATGAATTTAAATTATTCCTTTGCCTCCAGCCCTTGAGTATTTATCTTGCTTACATGTTCTTTAGGCACT ATACCTCCATATCATCTTCATAAGTAAGAAAGGAAGAAAGAGAAACTGACCTGGAGCAATGTAACCATATGATCCAGAAACCCTGGACATGGCACAACCT CCCTCACTAGGCTCATGCTGCAAGGTCTTAGCCAACCCAAAGTCTGCTAAACGAGGCTTAAATTCAAGATCCAGCAATATGTTATTACTTTTCACATCCC TATGAATTATAGCAGGCACACAATCATGGTGTAGGTAAGCCAACCCCTGAGCTGCACCTACAGCAATGTTGAACCTCTTAGACCAATCCAAAAACTGTCC ATATTTTTGTTCATGCAAAACATCACCTAAGCTCCCATTATCTAGGTACTCATACACCAAAATCCTGAAGTCATCAGCACTGCAACTAAACAACAGTTTC ACAATATTAGCATGCCGGATTCTACCCAATGTCTCAGTCTCCGACCTGAACACCGATTCCATGTCTGATCCTTGTGTTCCTCCCCAGAGTTTCTTTACCG CCACTGTCTGACCCGCTTTTAGATCCACCCGGTAGACCTGACCTGAATTCCCTGTGCCAATTATGTTCTCGCTGGTTAAGAATGGGACAATGTCTTGTTC ATTGAACCCAACCATTTGGAAAGTTGTTACCTTAAATGAATGCTTAGGAAGTGACTTTTTCTTCAGAAACCATAACAGGGACACTAGGAGGAGAACAGCA CAAGCAGCCAAAAGGATTATAGCAACGAGAGAAAAGGGTCTGTGCTTGGAACAAGAAGGGAGGATTTTGATAACTGGGCTACACAGACCCGGGTTACCTG TTAAACCTGCTAAGTACACTTCATGGTTGAAACCTGAAGGAACCTTCCCATACAACTTGTTACCCGAGACATTGAACTGGTTCAGTGTCAGATTCATCAA CTCTACCGGAATCTCCCTCGTGAGAGAATTCATGGCGAGGTCAAGGTATGTTAACTGCGGCAAATCACCAAGTTCCGGTGGTATCGAACTGCTGAATTGG TTATGTGACAAGTTCAACTCTGTTAACTCAGTCCATGAACTCACATTGCTAGGAATCTCACCAGTGAACATGTTTTCTTGCATACGAAGGTTCTGTAACT TTTTCAACCGAGTTAGGCACGCAGGAGCATCACCACTGAACATGTTCTTGCTTATGTCAATCTTCATTAGCTGATCAAGCTTACAAATTCCTGTTGGGAA TTGACCAGAAAAGCTGTTACTGCATAAAGTAAGTGTTGAAAGTCCCTTGGAATTAGATATGGATTCAGAAATGGAACCTTGGAACCTGTTCTTATCCATT TCAAGAAAACCAAGTTTTGGAAGGCTCCAAAACTTTGGTGGCACGTGCCCAGAAAGTTGGTTGTTCTTGATTCTAACATATCCGAGGGAATAACAATGTC CATATTGATCAGGCAGAGTTCCAGAGAATCGATTACCGAGTATGATTAGACGCTGAAGCTTGTTCCTTTGACAAAGATACTTAGGCAATTCACCACTCAA ATGATTAGTTGATACATCAATATCCTCTAAATCAGAGTTTTTCCCCAGAATCTGAGGTAACTTCCCATTGAAGCTGTTGTTGAAGAGTTTCAGATGCTGC AAATTCGGGTTTGAAGCTAAACTTTCAGGGATTTCTCCTTCGAGATGATTGTCATTTAAGTTAAGTGAAAAAAGATGCATTGAAGCGATTTTGTCTGGTA ATTTTCCAGTTAAACAGTTCTGAGAGAGGTCTAAGTCAATTAAATTGCTGAGGTTTCCCAAACCTTGTGGCAATTCACCAGAAAGTTGATTTTGAAATAG ATAAAGTTGCTTCAACTTTACCAAACCAGAAATGCTGTTTGGGATTTTACCTGACAAAGAGTTTTGAGACAAATCCAAGTGCTTGAGCGAAACAAGGTTC CCAATGGAGTCTGGTATGTCCCCTATGAGGTTCAATTTGGCGAGATAAAGAACTTCAAGATTTGAAAGATTTCCAAGTTGGGAAGGTAAAGGTCCTGGCT TTAATGGATTGAAAGCTAGTTCCAATTGAGTTAATGCATTGAGTTTGCCTAAGAATGAAGGAATCGTTCCGTTGATTAAGTTACCAGATAAAATGAGAAC CTCTAATTGTGGAAGGTTACCATAATTTCCCGGAATGTCACCGGTGAAGTTGTTACTCGAGAGATCAAG
• Tissue: pods
• Gene name: LI_gene_175088;
• Additional information: details;

Expression of Ll_transcript_280172

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 3
• PS2: 0.3
• PS3: 1
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280172

• Blastp: LRR receptor-like serine/threonine-protein kinase HSL2 from Arabidopsis with 55.85% of identity
• Blastx: LRR receptor-like serine/threonine-protein kinase HSL2 from Arabidopsis with 55.31% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT5G65710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444967.1)
• Pfam: Leucine rich repeat (PF13855.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;