| Id Trinity | TRINITY_DN50159_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_279289 |
| Sequence | TGTCTTTGTAATTTAAGTGGGACCACTCTTCAATACAAGACAACCAATGGCATTTTGGTCTTATCACATCCTTCTCTATCTTCCTCAGTACCTCCTACCT CCTTCTTCAACTTCCCAAGAGCCAAAATCACACGCACAATAAATCTCCCTCTTAACCGTTACTCCTCCGTCATTTTTCTCACACACAACAAAAAAAACAC TCACACCCAAACTATGTTGAAAAAGCAAAAGCTATTTACAACACAACAACACAATAAGAAGAAGAAGAACAACAACTTATTTGAGATTCTGTCAGAAGAA CTTATTTTCACAATTCTAGATTTTCTCGAAGGGGACCCACCCGCCAAAAAATCATTCTCCTTAGTCTGCAAATCGTTCTATTTCATAGAATCCAAACACC GCCGAACACTAACGCCGCTCAGGACCGACCACCTCCCCGCTGTCCTAAACCGCTACCCGTCAGTTACCGATCTCGACCTCACGCTCTGCCCGCGCGTGAC GGACAACTCCCTCGCCCTCGTCGCGGGCGCGTACAGGGACACGCTCCGGCGCGTGGATCTGTCACGGTCGAAGTTTTTCAGCGGGAATGGGTTGCTGAGT TTGGGGGTGAATTGCAGCAACCTGGTGGAGCTGGACCTGTCGAACGCGACGGGGCTGAGGGATGGCGCGGTTGCGGCGGTGGCGAGGGCGAAGAATTTGG AGAAGCTGTGGTTGGGGAGGTGTAAGTTGGTTACTGATATGGGGATTGGGTGTGTGGCGGTTGGGTGTAGGAAATTGAGATTGATTTGTTTGAAGTGGTG TGTTGGTGTGGGAGATTTGGGGGTTGAATTGGTTGCTATCAAGTGTAAAGAACTTAGGACTTTAGATCTCTCTTATTTGCCTATCACAGAGAAATGTCTG TCATCAATCTTTAAATTGCAACATCTTGAAGATTTGGTCCTTGAAGGATGCTATGGCATTGATGATGACAGCCTCGATGACGATCTCTTCAAGCAAGGGA GCAAAACATTAAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCACATTGGTCTATCAAAGCTAACAAGCATATCTGGAAGCATAGAACAACTCAT TTTAGCAGATGGTTCTCCTGTGACCCTTGTTCTTGCTGATGGTTTGAATAAACTCGCAATGTTACAATCGATCATATTAGATGGCTGCCTGGTAACTTCT TCTGGATTAATGGCCATTGGAAATTTGTGCATTTCACTCAAGGAGTTGAGTCTAAGCAAATGTATGGGAGTCACTGATGAAGCTCTCTCATTTCTTGTGT CAAAACATAAAGACTTGAGGAAGCTTGACATCACATGCTGCCGCAAGATAACTGGTGTTTCTATTGCCAGCATTGCAAATTCATGCATTAATCTCACTTC GCTCAAAATGGAGTCGTCTACTCTTGTTCCGAGAGAAGCATTTGTCTTGATTGGACAGAAATGTCATTATCTTGAGGAGCTTGATCTAACAGATAATGAA ATTGATGATGAAGGTCTTAAGTCAATTTCTCGTTGTTCTAGTCTCTCAAGCCTGAAAGTTGGAATCTGCCTTAACATAACTGACAGGGGACTTGCCTATG TTGGCATGAATTGCTCGAAGTTAAAGGAGCTGGATCTTTATAGGTTTGTGATTCAAATTTATGAGTTTTTACTTTTCTTGTCAATAGATTGAATAATCTA TTTAATCTTTGTGGGTAGATGAGAAATTGGATTATATGTACTAACTTTTAATTTAAACAAGGCACCAATAAACAAGTATGGAAGGGGAGGTTGAGTTTTC AAGTTAAAGTAATAAAATTTGTATATATATTTTGCCTCAGTGGTTACTAATTACTCCTTTCAATCCTATATAAGTCATGTTCTAGAAGGTTTCTTTGGTC CTTTCTATAAGGCGTTTTATACTTTCAATGATCAATTAATTTTCTTCTTCCTAATTTGCCTCTATTAATTTGTTGCTCAACTAATGTGGTAGGTTGTAAA TGGTAGTGGAAATGATGGGAGTGCATAATGAAATTAATGAGATAAAAGGGTAAAAATGCAAATGTTGTAGTTTTTAAAAAAAATCAAGGAAGTACCTAAC TTTAACTATTTACCTTGGTCTATGTAATTTGGTTAAAGACCGAAAGGAGTACTAGTTAGTACTTAGTATTGATGTATTAATATCTACAATATATACATAT GGAAACAAAATATCTACCAAACTAATTTAGATGTCTCAATTTCATTGGATGAGTCAAAAGCTGGTCTCAGACCAGCATCTATAGTAGTTTGGCTTTATTT ATTAGAAATTATGGTATGAAAATTCTATGTTTACACTGTTTGCGTAAAGATCATTGTTCATTGTCATAAGATATCATTTTTCCTTTTCAGGTCTACAGGA ATAACAGATTTTGGCATTGCAGCAGTTTGTCGTGGTTGTCCTGACCTTGAGATGATAAACACAGCTTATTGTACGAGCATCACTGATAGTTCATTATTCT CATTGTCGAAATGCTCAAATTTGAAGATACTCGAAATCCGTGGATGTCTTCTTGTTACATGTATAGGTCTAGCAGCTATTGCAATTAATTGCAAACAACT AAGCCGTCTAGACATAAAGAAGTGCTACAACATCGATGATAGTGGAATGATTCCACTGGCTCATTTCTCTCAAAATTTAAGACAGATAAACATGTCATAT AGCTCGGTTACAGATGTGGGGCTTCTGACACTTGCTGGTATCAGTTGCCTACAGAGTTTTACAATGCTTCACCTACAGGGCTTGGTTCCTGGAGGACTTG CTGCCGCCTTACTGGCATGTGGAGGGCTAACAAAAGTGAAGCTCCATCTTTCACTAAGATCTCAGTTACCCGAGCCACTTATCAGACATGTAGAATCCCG TGGCTGCATATTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCGAAATGTTGGAAAATGCAGTTAGAAGATCTGATGCAATAGGATTTTTTC AGGTCGTTCGAATTGAGGTTGAGAAAGACGACATGCATACTAAATGCGAATCAGTAAAGAATCTCGTTTGTATTGGATAATAATCAAAACTCATCAACTT CTGTACTGTGGACGTTAGAGGAAAGATGAGCAAGAGTGAAAAGATGTGTGGAGTTTTCTGTTTAGTCTTTTGGAGGCAACACTATCCTCCGGAAAGACCT TCCAATGTAGAAACTTAATTTTTGTGTGTACTCTTTTTAGCAACTCATGCAGTTATGTTGTCCTTGGTAGACCCAAAAGGGTGGCTCAAGTGGTAATCAA GCTTCAGCTGATGGGTTTAGGTTTCGATCTTGTGTCGTTGGAGCCTGTAGAAAAGTTCTTGCATGGAGGGGAAATCTTTTTTCCCCAATGAGAAGCAGGT ACAATCAATTGTATAAACACTTTGTATCCTCTTCTAATTCTTGTGTGGACTGTAACAACTAAGTAATTTTGTTGTCCTTGGTTGATTGTTGAAGAAGGGG CTATTTTTCCCCCTCCTTTGAAGAATATTCAAGTGCATAATATCTTGTACCAAAGAATTGTATAATATCTTCACAACCGAGGGCAAGTTTGTCATGATGG TAATATTGTTGCTTAGTAACATTTATATTCTCAGGATCTCACTAAGTGGGAGCCTCGTGCATTGGCCACCCTTTTCTATATTTGTAGCCCCTCTTATTTG TATTAGTCCAATTGGAAGCTTTTAGAAGCAAATAATGCAAGATGTTTGAAAATTCAGTTAGTCTTGCTAACTTTTGTTGACTATATTTTCTGTTCTAATT ACTTGAATGATTGTGTACAATGTGAATATGTGATTATCCATTTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175102; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279289
| Blastp | F-box/LRR-repeat protein 3 from Arabidopsis with 65.5% of identity |
|---|---|
| Blastx | F-box/LRR-repeat protein 3 from Arabidopsis with 64.63% of identity |
| Eggnog | F-box and leucine-rich repeat protein(ENOG410XQ54) |
| Kegg | Link to kegg annotations (AT5G01720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464219.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |