Ll_transcript_279290

• Id Trinity: TRINITY_DN50159_c1_g2_i9
• Name Transcript: Ll_transcript_279290
• Sequence: TGTCTTTGTAATTTAAGTGGGACCACTCTTCAATACAAGACAACCAATGGCATTTTGGTCTTATCACATCCTTCTCTATCTTCCTCAGTACCTCCTACCT CCTTCTTCAACTTCCCAAGAGCCAAAATCACACGCACAATAAATCTCCCTCTTAACCGTTACTCCTCCGTCATTTTTCTCACACACAACAAAAAAAACAC TCACACCCAAACTATGTTGAAAAAGCAAAAGCTATTTACAACACAACAACACAATAAGAAGAAGAAGAACAACAACTTATTTGAGATTCTGTCAGAAGAA CTTATTTTCACAATTCTAGATTTTCTCGAAGGGGACCCACCCGCCAAAAAATCATTCTCCTTAGTCTGCAAATCGTTCTATTTCATAGAATCCAAACACC GCCGAACACTAACGCCGCTCAGGACCGACCACCTCCCCGCTGTCCTAAACCGCTACCCGTCAGTTACCGATCTCGACCTCACGCTCTGCCCGCGCGTGAC GGACAACTCCCTCGCCCTCGTCGCGGGCGCGTACAGGGACACGCTCCGGCGCGTGGATCTGTCACGGTCGAAGTTTTTCAGCGGGAATGGGTTGCTGAGT TTGGGGGTGAATTGCAGCAACCTGGTGGAGCTGGACCTGTCGAACGCGACGGGGCTGAGGGATGGCGCGGTTGCGGCGGTGGCGAGGGCGAAGAATTTGG AGAAGCTGTGGTTGGGGAGGTGTAAGTTGGTTACTGATATGGGGATTGGGTGTGTGGCGGTTGGGTGTAGGAAATTGAGATTGATTTGTTTGAAGTGGTG TGTTGGTGTGGGAGATTTGGGGGTTGAATTGGTTGCTATCAAGTGTAAAGAACTTAGGACTTTAGATCTCTCTTATTTGCCTATCACAGAGAAATGTCTG TCATCAATCTTTAAATTGCAACATCTTGAAGATTTGGTCCTTGAAGGATGCTATGGCATTGATGATGACAGCCTCGATGACGATCTCTTCAAGCAAGGGA GCAAAACATTAAAGAAACTTGATATCTCAGGTTGTCAAAACATAAGTCACATTGGTCTATCAAAGCTAACAAGCATATCTGGAAGCATAGAACAACTCAT TTTAGCAGATGGTTCTCCTGTGACCCTTGTTCTTGCTGATGGTTTGAATAAACTCGCAATGTTACAATCGATCATATTAGATGGCTGCCTGGTAACTTCT TCTGGATTAATGGCCATTGGAAATTTGTGCATTTCACTCAAGGAGTTGAGTCTAAGCAAATGTATGGGAGTCACTGATGAAGCTCTCTCATTTCTTGTGT CAAAACATAAAGACTTGAGGAAGCTTGACATCACATGCTGCCGCAAGATAACTGGTGTTTCTATTGCCAGCATTGCAAATTCATGCATTAATCTCACTTC GCTCAAAATGGAGTCGTCTACTCTTGTTCCGAGAGAAGCATTTGTCTTGATTGGACAGAAATGTCATTATCTTGAGGAGCTTGATCTAACAGATAATGAA ATTGATGATGAAGGTCTTAAGTCAATTTCTCGTTGTTCTAGTCTCTCAAGCCTGAAAGTTGGAATCTGCCTTAACATAACTGACAGGGGACTTGCCTATG TTGGCATGAATTGCTCGAAGTTAAAGGAGCTGGATCTTTATAGGTCTACAGGAATAACAGATTTTGGCATTGCAGCAGTTTGTCGTGGTTGTCCTGACCT TGAGATGATAAACACAGCTTATTGTACGAGCATCACTGATAGTTCATTATTCTCATTGTCGAAATGCTCAAATTTGAAGATACTCGAAATCCGTGGATGT CTTCTTGTTACATGTATAGGTCTAGCAGCTATTGCAATTAATTGCAAACAACTAAGCCGTCTAGACATAAAGAAGTGCTACAACATCGATGATAGTGGAA TGATTCCACTGGCTCATTTCTCTCAAAATTTAAGACAGATAAACATGTCATATAGCTCGGTTACAGATGTGGGGCTTCTGACACTTGCTGGTATCAGTTG CCTACAGAGTTTTACAATGCTTCACCTACAGGGCTTGGTTCCTGGAGGACTTGCTGCCGCCTTACTGGCATGTGGAGGGCTAACAAAAGTGAAGCTCCAT CTTTCACTAAGATCTCAGTTACCCGAGCCACTTATCAGACATGTAGAATCCCGTGGCTGCATATTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGG ACCCGAAATGTTGGAAAATGCAGTTAGAAGATCTGATGCAATAGGATTTTTTCAGGTCGTTCGAATTGAGGTTGAGAAAGACGACATGCATACTAAATGC GAATCAGTAAAGAATCTCGTTTGTATTGGATAATAATCAAAACTCATCAACTTCTGTACTGTGGACGTTAGAGGAAAGATGAGCAAGAGTGAAAAGATGT GTGGAGTTTTCTGTTTAGTCTTTTGGAGGCAACACTATCCTCCGGAAAGACCTTCCAATGTAGAAACTTAATTTTTGTGTGTACTCTTTTTAGCAACTCA TGCAGTTATGTTGTCCTTGGTAGACCCAAAAGGGTGGCTCAAGTGGTAATCAAGCTTCAGCTGATGGGTTTAGGTTTCGATCTTGTGTCGTTGGAGCCTG TAGAAAAGTTCTTGCATGGAGGGGAAATCTTTTTTCCCCAATGAGAAGCAGGTACAATCAATTGTATAAACACTTTGTATCCTCTTCTAATTCTTGTGTG GACTGTAACAACTAAGTAATTTTGTTGTCCTTGGTTGATTGTTGAAGAAGGGGCTATTTTTCCCCCTCCTTTGAAGAATATTCAAGTGCATAATATCTTG TACCAAAGAATTGTATAATATCTTCACAACCGAGGGCAAGTTTGTCATGATGGTAATATTGTTGCTTAGTAACATTTATATTCTCAGGATCTCACTAAGT GGGAGCCTCGTGCATTGGCCACCCTTTTCTATATTTGTAGCCCCTCTTATTTGTATTAGTCCAATTGGAAGCTTTTAGAAGCAAATAATGCAAGATGTTT GAAAATTCAGTTAGTCTTGCTAACTTTTGTTGACTATATTTTCTGTTCTAATTACTTGAATGATTGTGTACAATGTGAATATGTGATTATCCATTTTAAA A
• Tissue: pods
• Gene name: LI_gene_175102;
• Additional information: details;

Expression of Ll_transcript_279290

FPKM

• PAB: 17
• PNAB: 4.3
• PS1: 10.7
• PS2: 5.3
• PS3: 5.8
• PW1: 9.2
• PW2: 10.5
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279290

• Blastp: F-box/LRR-repeat protein 3 from Arabidopsis with 63.71% of identity
• Blastx: F-box/LRR-repeat protein 3 from Arabidopsis with 63.71% of identity
• Eggnog: F-box and leucine-rich repeat protein(ENOG410XQ54)
• Kegg: Link to kegg annotations (AT5G01720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464219.1)
• Pfam: Leucine Rich repeat (PF13516.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;