Ll_transcript_279965

• Id Trinity: TRINITY_DN50163_c0_g1_i1
• Name Transcript: Ll_transcript_279965
• Sequence: AGCCGATCAACAATCCCTGATTCTATACCCTAGAACATATCGGGATTAAAATAATAATAAAAAAGAAGGAATTAAAAAATAATAAAAATAATAAAAAAGA AGAAAGAGGATGAGGAGGTCTGAATTAGTTACTAGTTACTCCCATCAAAGGCGATTCCAAGATTTTTCTTTTACCAACTGCTGCATTTGTTAGACACACG CACAACACACAAATACACCTGATCCATCCTTGGGTCAACTATAGATGAAGGAAGAAGAGGAGAAGGAGAAGATGATGAAGACTGTGGACCTTGATGATAT TGAATCAACTTCTCCCAAATCATCCCATGCTTTTCATTTTGAGTCTCAGTCAACCCTTAATCACACTCACAATTCCTCTTTCTTCAACATCAGGACCGTC TATATTGTCTTCATTAAACCCAAGATCAATGTCTTACTCCCCTTTGGTCCTGTCGCTATCTTACTCCATTATCTCACTCCAAAACATCATAATGGATGGG TCTTCTTCTTCAGCTTACTCGGTATTGCTCCTCTGGCTGAACGTCTCGGTTATGCTACTGAACAGCTTGCTTTCTACACTGGACCAACAGTTGGAGGTCT CCTAAATGCAACATTCGGCAATGCAACTGAAATGATTATATCAATTTATGCATTGAAAAACGGTATGATTAGGGTTGTTCAGCAATCTTTACTCGGTTCG ATTTTGTCAAATATGCTTCTAGTTCTTGGATGTGCTTTCTTCACTGGTGGGATTGTCCACCACAACAAACAACAGGTTTTTAATAAGGCAGCTGCTGTTG TCAATTCTGGGTTGCTGTTGATGGCTGTCATGGGAATACTGTTCCCTGCAGTGCTTCACTTTACTCATTCTGAACTTCATTTTGGGAAGTCAGTCTTATC TTTATCAAGATTCAGCAGCTGTATAATGCTAGTGGCTTATGCAAGCTACCTTTTCTTTCAACTGAGAAGCCAGCAAAATCTTTATAGTCCTGTTCATGAG ATAGTAGATAGTAGTGAAAATTCTGAAGAGGAGGAAGAAATTGAATTAACTAAATGGGAAGCAATTGTATGGCTTGCTATTTTAACTGCATGGGTATCTG TATTGTCTGGATACCTTGTAGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAATGGCCTTCATTAGTGTTATCTTGCTTCCAATTGTGGGCAA TGCTGCTGAGCATGCAAGCGCTATTATGTTTGCCATGAAGGACAAGCTTGATATCACAATTGGAGTTGCTGT
• Tissue: pods
• Gene name: LI_gene_175124;
• Additional information: details;

Expression of Ll_transcript_279965

FPKM

• PAB: 0
• PNAB: 3.4
• PS1: 1.8
• PS2: 3
• PS3: 2.5
• PW1: 0.9
• PW2: 0
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_279965

• Blastp: Vacuolar cation/proton exchanger 2 from Oryza sativa with 71.08% of identity
• Blastx: Vacuolar cation/proton exchanger 2 from Oryza sativa with 77.21% of identity
• Eggnog: Calcium Proton(COG0387)
• Kegg: Link to kegg annotations (4333044)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436160.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;