Ll_transcript_280553

• Id Trinity: TRINITY_DN50164_c0_g1_i3
• Name Transcript: Ll_transcript_280553
• Sequence: CGCAAAGGGAATTATTACTATTATGTGAAAAATTTGGAAGGGAAGGAGTATGTTCAATATTGTCGGCGTCTTATACCTCATAACCAAAAGGTTCCATCTG TGTATGATATCATGCCCACAGGTCCTGAAGCTCCTCATGAGCATGTTATTTTGGATGAAAATATCAATGCACAAAATTACCAATACTACAGTATTGGTGC TTTTAAGGTTAGTCCAAATAACAAGTTGGTAGCATATGCAGAAGACACCAAAGGAAATGAAGTATATAGTGTTCATGTCATTGATGCTGAGACTAAAACT CTTATTGGAGAGCCTCTTGTTGGTGTAACATCATACCTTGAATGGGCTGGTGATGATTCTCTGATTTATATCACGACGGATGAGACTCTAAGGCCTGACA AGGTATGGTTGCATGTGTTGGGAACAGAACAATCAAATGATACTTGTCTTTATGTGGAAAAGGATGATATGTTTTCTGTTGACCTTTATGCTTCTGAGAG CAAACAATATTTGTTTGTTGCATCCGAAAGTAAAAATACGAGGTTTAACTTTTATCTGGATGTTTTGAAACCTGGAGAGGGTCTTAAAATTTTGACATCA CGAGTGGATGGTATTGACACAACTATCAGCCATCGTGGAGATCATTTCTTTATTAAGAGGAGAAGTGATCAATTTTTCAATTCAGAAGTAGTAGCTTGTC CTGTCGATAACACCTCCTCAACTACAGTTCTTCTTCCCCACAGGGAAAGCGTAAAAATTCAGGAGATACAACTTTTTAGTGACCATCTTGTTGCATATGA AAGAGAAAATGGCCTTCAAAAGATAACAATTTATCACCTTCCACCTATTGGTGAATCACTAAGGAGCCTTGAAGACGGTCAGGCGGTTAATTTCATTGAT CCAGTATATTCAGTGTACTTATCAGAATCAGAGTTCTCGTCAAGTATTTTACGATTTTCATATAGCTCATTAAAGACTCCATCATCTGTATATGATTATG ACATGAAGGCAAGCATTTCGGTTTTGAAGAAGATTGACTCGGTTTTGGGAGGTTTTGATGCAACACGTTATGTCACTGAAAGAAAGTGGGCACCTGCTTC AGATGGAACTTTGATTCCCATATCAATTGTTTACCGAAAAGATCTTGTGAAACTTGATGGATCAGATCCATTACTACTTTATGGCTACGGGTCTTATGAG GTATGCGTTGATCCCAGTTTCAAGTCATCACGGCTTTCATTACTAGATCGAGGTTTTATATACGCCATAGCTCATATACGTGGAGGTGGTGAAATGGGGA GGCAGTGGTACGAGAATGGGAAGCTTTTGAAGAAAAAGAATACTTTCACTGATTTCATTGCTTGTGCGGAATATTTGATCGAAAACAAATTTTGTTCCAA GGAAAAACTGTGCATCGAAGGAAGAAGTGCCGGTGGTTTGCTAATTGGATCGGTTCTCAATATGAGACCAGATTTATTCAAGGCTGCTATTGCTGGGGTG CCTTTTGTGGATGTTGTGACAACAATGCTTGATCCAACTATTCCTCTCACTACTTCAGAATGGGAGGAATGGGGTGATCCAAGGAAGGAGGAGTTCTACT TCTACATGAAGTCATATTCCCCTGTTGATAATGTAAAGGCACAAAGTTATCCTCACATTCTTGTTACTGCTGGATTAAATGACCCACGAGTTTTGTATTC TGAACCTGCAAAGTTTGTGGCAAAACTGAGGGATATGAAAACTGGTGATAACATACTGCTGTTTAAATGCGAGCTTGGCGCTGGTCATTTTTCGAAGTCG GGAAGGTTTGAGAAGCTTGAGGAAGAAGCATTCACTTATATATTCATCTTCAAGGCTCTAAACTTGACTAATTTGCTTGAGTCTTGAGATGCATGAAGAA CATATTAAGAGATTAATCACCTTATGGGTTAAGTTAGCAATTACAATAATCACTTTTCTTCAATGGAACAACTTGTATGGACCCCTAAATGAGAAGCACC ATTTTGGAGTCTAATGTGTACTTTTGAAGAGATTTGGGACCATTGTCTTAAAAGTCTTATATGTATCAGAAGTCTTCAAAATCCTAAGTTTTCAACAATA TCCCACATGGAGCATGGTCACTGATACCGCCATCAGTGCAACCTAATTCCATTCCCCCATCAATTATTCAATCAATTATGAACAACCCATTACCC
• Tissue: pods
• Gene name: LI_gene_175127;
• Additional information: details;

Expression of Ll_transcript_280553

FPKM

• PAB: 7.9
• PNAB: 38.6
• PS1: 52.1
• PS2: 25.5
• PS3: 42
• PW1: 36.5
• PW2: 29.8
• PW3: 16.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280553

• Blastp: Protease 2 from Moraxella with 38.85% of identity
• Blastx: Protease 2 from Moraxella with 38.22% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452573.1)
• Pfam: Prolyl oligopeptidase, N-terminal beta-propeller domain (PF02897.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;