Ll_transcript_280502

• Id Trinity: TRINITY_DN50171_c1_g2_i1
• Name Transcript: Ll_transcript_280502
• Sequence: TTTGTTCTTTCACTAACCCTAAATACCAAACCCTCGCACGAACACAAACACAAGCATCCAGTTCAGGCAGTCACGAACCTCATCACCCTCTGGCCGTCAA CCACACGCTATACTCACACTCGCCAGCAGTTATGACGGAACCACACCACAGCCACGACACCTTGCCTTCTTCTGTTGTCCAAACTAAGCAGAAGAAGCTT CGCAAGAGAAAAAGAGCTCGCAAGACTGAACAGTTAAACCACCAATTGGAAGAACAAGAGAACAAAGATGGTGAAGAATCGTTGGAGGAAGAGAATGATG CAAATATGAGTGGTGGGGATGTTAGAGAAGAACAGAATTTAGAAGATGGTGATGGTAATAATAATGAGGGTGAGGAAGGGGGAGAGAACGTTGCCTCTGG GATTATGAGTGTGGAGTCTTTTGAGTCTCTGGGATTGTCTGAACCAACTTATAAGGCTGTTATGGATATGGGTTTCCATCACATGACTCAGATTCAAGCA AGATCAATTCCACCACTTCTGATTGGAAAAGATGTTCTCGGTGCTGCAAGGACAGGGGCTGGAAAAACTCTTGCCTTTTTAATTCCAGCTGTGGAATTGC TGCACGGCATCCAGTTTACACCTCGAAGTGGTACTGGTGTTGTTGTAATATGCCCGACTAGAGAGCTCGCAATTCAGACACATGCTGTAGCAAAGGAACT ACTCCGATATCATTCACAAACACTTGGATTGGTTATTGGGGGTGCAGGTAGAAAGGGGGAAGCTGAACGAATTGTTAAAGGGGTAAATCTGTTGGTAGCA ACGCCTGGGCGTCTTCTCGATCACCTTCAAAATACAAAGGGATTCATATATAAAAACTTGAAGTGCCTCATAATTGATGAAGCTGACAGGATATTGGAAG CAAATTTTGAGGAGGAAATGAAGCAGATCATTAACATACTTCCAAAGAGCAGGCAAACAGCTCTGTTTTCAGCCACACAAACGAAGAAGGTTAAGGATCT TGCTCGCTTGTCGTTTCAGACACCTCCTATCTACATTGATGTGGATAATGGGAGAACAAAGGTCACAAATGAAGGATTGCAGCAGGGCTATGTTGTTGTT TCCTGTGCCAAGCGTTTTGTTGTTCTCTATTCATTCTTGAGGAGATACCAGTCCAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACTCTGTCAAATTCC ATGCAGACCTTCTGAAGTGCACTGGGTTGGATTGCTTAAATATCCATGGAAAACAAAAGCAGCATGCCCGGACAACAACCTTCTTTAATTTCTGCAAAGC AGAAAAGGGAATCTTGCTCTGTACTGATGTTGCTGCTCGCGGACTTGACATACCTGATGTGGACTGGATTGTGCAGTATGATCCACCTGATGAACCGAAG GAATATATTCATCGGGTTGGTAGAACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTGCTTTTTCTGATTCCAGAAGAAGTGCAATTTCTTCGCTATT TGAAGGCAGCAAAGGTCCCTGTGAAAGAGTATGCATTTGAAGAAAAGAAGCTTGCAAATGTGCAGTCGCACCTGGAGAAGTTGGTGGCTGGTATTTATCA CTTGAACAATATGGCTAAAGAAGCTTATAGATCATACTTATTGGCATACAATTCACACTCTATGAAGGATATATTCAACGTTCACCGCCTTGATTTACTG GCTGTTGCTGCTTCATTCTGTTTTTCAAACCCGCCAAAGGTGAATCTGAACATAGACAGTAGTGCTTCGAAGCATAAGAAGAAAATGCGTAAGGTAGAAG GAAGCAAGCACGAGCTTCCGTGACAAGAATATGTATGCGAAGAGAAATGCCGATGATCAGTGACAGTTAGCGGGGACTTGTCAAGGCTGTGTCGTGGATT TGATTCCGGTCATGCCCTTCACATCTCAGAGAAAGTTTTGGTAGGAACACTTATTTTATATGATAAGATTGGATTCATTAGTTATAGATAAAAAACACAT TATTAGAGTAATTGGAGTGTTTTCTTCAACAGAAATGTGTTTATGTATTCTTCAACTGTAATATTCAGCAGGATTACTGGTGCCCCATCCCATGTTTCCA GTTTATAAGTTCTATCATCACTTTTCAGAAGCAGTTTATAAGTTCTATCACATAATTTTGTCAATTAATTTATAATCATGCAATTTTTCTTGAAGAATTC AATACTTTATTGTTTATTATATTTAATAAATGGTTTCAATACTCAAATAGTAGAG
• Tissue: pods
• Gene name: LI_gene_175177;
• Additional information: details;

Expression of Ll_transcript_280502

FPKM

• PAB: 4.8
• PNAB: 18.7
• PS1: 17.3
• PS2: 20.5
• PS3: 20.1
• PW1: 19.2
• PW2: 21.1
• PW3: 23.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280502

• Blastp: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 69.34% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 69.67% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (4334469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437092.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;