Ll_transcript_280505

• Id Trinity: TRINITY_DN50171_c1_g2_i2
• Name Transcript: Ll_transcript_280505
• Sequence: AAAAGAAAAAAAATTGGTTCAAAATATATATTTTACTAACCCTAAAACCCTAAACCCACAATACCTGCACCCACACACAAACAAAAACTTCCTCACCTCA CCACAGGCCCTCAAGCACACTATAGCAATCCTTGCAAGCAGTTATGGCTGAACAAGAGCAAAACCCTAACACCTTGCACGATTCTGATGCCCAAACTAAG CAGAAGAAGAAACTGCGCAAGAGAAAAAGAGTTCGAAAGACTGAACATGTAAACCCCGATTTCGAGGAACAAGAGGAGAAAGAATCCGAGGAGGAGGCAA ACGAAGCAAATGTGAATGATGATAAGAATGACGAAAACTCAGAAGAAAATGATAATACTAATGACGAAGATGATGAAGGGGGAGAGAACTTTGCTTCTGG AATTATGAGTGATGAATCCTTTCTGTCTTTGGGTTTGTCTGAACCCACTTATACGGCTATTATTGATATGGGTTTCGACCGTATGACTCAGATTCAAGCA AGAGCAATTCCACCACTTCTGACGGGAGATGATGTTCTTGGTGCTGCAAGGACAGGGGCTGGAAAAACTCTTGCCTTTTTAATTCCAGCTGTTGAATTGC TGTACAAAATTCAGTTTACACCTCGCAGTGGTACTGGTGTTGTTGTCATATGCCCGACTAGAGAGCTTTGCATTCAGACACATGCTGTAGCAAAGGAACT ACTGAAGTATCATTCACTAACTCTTGGGTTGGTTATTGGAGGTTCAGCTAGAAAAGGAGAAGCCGAACGCATTGTTAAAGGGGTAAATCTGTTGGTAGCA ACACCTGGACGTCTTCTTGATCACCTTCAAAACACAAAGGGATTCATATATAAAAACTTGAAGTGCCTCATGATTGACGAAGCTGACAGGATATTAGAAG CTAACTTTGAGGAGGAAATGAAGCAGATCATAAATATACTTCCAAAGAGTAGGCAAACGGCTCTCTTTTCAGCCACACAAACGAAAAAGGTTAAGGATCT TGCCCGCTTGTCATTTCAGACAACTCCTATCTATATCGATGTGGACGATGGGAGAACAAAGGTCACAAATGAAGGATTGCAGCAGGGCTATGTTGTTGTT CCCTGTGCCAAGCGCTTTGTTGTTCTCTATTCATTCTTGAGGAGATATCTATCAAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACTCTGTTAAATTCC ATGCAGACCTTCTGAAGTGCACTGGGTTGGATTGCTTAAATATTCATGGAAAACAGAATCAGCATGCCCGGACAACTACCTTCTTTAATTTCTGCAAATC AGAAAAGGGGATCTTGCTCTGTACTGATGTTGCTGCTCGGGGACTTGACATACCTGATGTGGACTGGATTGTGCAGTATGACCCACCTGATGAACCAAAG GAATATATTCACCGGGTTGGTAGAACAGCTCGCGGGGAAGGCGGAAAAGGAAATGCTTTGCTTTTCCTGATCCCCGAAGAATTGAAATTTCTTCGCTATC TAAAGGCAGCAAAGGTCCCTGTGAAAGAGTATGCATTTGATAACAAGAAGCTTGTGAATGTACAGTCACAACTGGAGAAGTTGGTGGCTGGCATTTATTA CTTGAACAATATGGCTAAAGATGCTTATAGGTCATACTTATTATCATACAATTCACACTCTATGAAGGATATATTCAACGTTCACCGCCTTGATGTACTG GCTGTTGCTGCTTCATTTTGTTTTTCAAACCCGCCGAAGGTGAATCTGAACATAGACAGCAGTGCTTCGAAGCATAAGAAGAAAATACGCAAGCTGGAAG GAAACAGGCATGAGTTTCAGTAATATCAACCTTTATCCGAAGAGAAATATGGATGATAAGTGACAATTTGTGAAGCATTAGCCGAAGACGTCACGGCTGT AGTGGATTCGACTCCCACCATCTCCATCCTTACGACTTCGCATAAAGTTTCGGTAGGAAAACCTATTTTATACCATGAGTTTGATTTTGTTAACTGTCAA ACAACACATTATTAGAGGAATTGGAGGTATATTTTTTCCTGTACTGGAATGTCTGTATTCTTCAACTGTAATAATATTCATCCGGATTATTGGTGGCCCA TCCTATGGTTCCATGTATAAGTTTTATGATCAACTTTCATAAGCACTTTCCAATGGGTGCACATTTGCTGTCTCACACTTAGTGCCACTCCATGTGTCAT GGCCTTATGAATGATTAGAAAATTACTTAAAAATTAAATTTCAAGTTAATTATAAATTTTTCAACCAATCACAAGGCCATGGTACATGGAGTGACACTAA GTGTGAGACAGGAGATGTGTACCCCTTTCCAAGAGACAACTCCAGATAACTACATTGTTAACATTTGAATATCAGATAGTACATTATCGACCATTTATTT GTATTACTATTTTTGAAAAGTATAATTAAATATGAATGATGAATATTGTAGTGACATGTATCAAATTCATATACATGCATACATTTTTTTCTTTTCTTTT AATCTCTTTATATAATGACTGTCCTTGTATTATAGGGTTTCTTGTATCTTTTGTGCTTTTATTAAGCCTGAGGCAGTGAACTGGGC
• Tissue: pods
• Gene name: LI_gene_175177;
• Additional information: details;

Expression of Ll_transcript_280505

FPKM

• PAB: 0.1
• PNAB: 4.8
• PS1: 2.5
• PS2: 1.5
• PS3: 1.2
• PW1: 3.9
• PW2: 0.6
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280505

• Blastp: DEAD-box ATP-dependent RNA helicase 51 from Arabidopsis with 62.91% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 51 from Arabidopsis with 69.67% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT3G18600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437092.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;