| Id Trinity | TRINITY_DN50171_c1_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_280513 |
| Sequence | TTTGTTCTTTCACTAACCCTAAATACCAAACCCTCGCACGAACACAAACACAAGCATCCAGTTCAGGCAGTCACGAACCTCATCACCCTCTGGCCGTCAA CCACACGCTATACTCACACTCGCCAGCAGTTATGACGGAACCACACCACAGCCACGACACCTTGCCTTCTTCTGTTGTCCAAACTAAGCAGAAGAAGCTT CGCAAGAGAAAAAGAGCTCGCAAGACTGAACAGTTAAACCACCAATTGGAAGAACAAGAGAACAAAGATGGTGAAGAATCGTTGGAGGAAGAGAATGATG CAAATATGAGTGGTGGGGATGTTAGAGAAGAACAGAATTTAGAAGATGGTGATGGTAATAATAATGAGGGTGAGGAAGGGGGAGAGAACGTTGCCTCTGG GATTATGAGTGTGGAGTCTTTTGAGTCTCTGGGATTGTCTGAACCAACTTATAAGGCTGTTATGGATATGGGTTTCCATCACATGACTCAGATTCAAGCA AGATCAATTCCACCACTTCTGATTGGAAAAGATGTTCTCGGTGCTGCAAGGACAGGGGCTGGAAAAACTCTTGCCTTTTTAATTCCAGCTGTGGAATTGC TGCACGGCATCCAGTTTACACCTCGAAGTGGTACTGGTGTTGTTGTAATATGCCCGACTAGAGAGCTCGCAATTCAGACACATGCTGTAGCAAAGGAACT ACTCCGATATCATTCACAAACACTTGGATTGGTTATTGGGGGTGCAGGTAGAAAGGGGGAAGCTGAACGAATTGTTAAAGGGGTAAATCTGTTGGTAGCA ACACCTGGACGTCTTCTTGATCACCTTCAAAACACAAAGGGATTCATATATAAAAACTTGAAGTGCCTCATGATTGACGAAGCTGACAGGATATTAGAAG CTAACTTTGAGGAGGAAATGAAGCAGATCATAAATATACTTCCAAAGAGTAGGCAAACGGCTCTCTTTTCAGCCACACAAACGAAAAAGGTTAAGGATCT TGCCCGCTTGTCATTTCAGACAACTCCTATCTATATCGATGTGGACGATGGGAGAACAAAGGTCACAAATGAAGGATTGCAGCAGGGCTATGTTGTTGTT CCCTGTGCCAAGCGCTTTGTTGTTCTCTATTCATTCTTGAGGAGATATCTATCAAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACTCTGTTAAATTCC ATGCAGACCTTCTGAAGTGCACTGGGTTGGATTGCTTAAATATTCATGGAAAACAGAATCAGCATGCCCGGACAACTACCTTCTTTAATTTCTGCAAATC AGAAAAGGGGATCTTGCTCTGTACTGATGTTGCTGCTCGGGGACTTGACATACCTGATGTGGACTGGATTGTGCAGTATGACCCACCTGATGAACCAAAG GAATATATTCACCGGGTTGGTAGAACAGCTCGCGGGGAAGGCGGAAAAGGAAATGCTTTGCTTTTCCTGATCCCCGAAGAATTGAAATTTCTTCGCTATC TAAAGGCAGCAAAGGTCCCTGTGAAAGAGTATGCATTTGATAACAAGAAGCTTGTGAATGTACAGTCACAACTGGAGAAGTTGGTGGCTGGCATTTATTA CTTGAACAATATGGCTAAAGATGCTTATAGGTCATACTTATTATCATACAATTCACACTCTATGAAGGATATATTCAACGTTCACCGCCTTGATGTACTG GCTGTTGCTGCTTCATTTTGTTTTTCAAACCCGCCGAAGGTGAATCTGAACATAGACAGCAGTGCTTCGAAGCATAAGAAGAAAATACGCAAGCTGGAAG GAAACAGGCATGAGTTTCAGTAATATCAACCTTTATCCGAAGAGAAATATGGATGATAAGTGACAATTTGTGAAGCATTAGCCGAAGACGTCACGGCTGT AGTGGATTCGACTCCCACCATCTCCATCCTTACGACTTCGCATAAAGTTTCGGTAGGAAAACCTATTTTATACCATGAGTTTGATTTTGTTAACTGTCAA ACAACACATTATTAGAGGAATTGGAGGTATATTTTTTCCTGTACTGGAATGTCTGTATTCTTCAACTGTAATAATATTCATCCGGATTATTGGTGGCCCA TCCTATGGTTCCATGTATAAGTTTTATGATCAACTTTCATAAGCACTTTCCAATGGGTGCACATTTGCTGTCTCACACTTAGTGCCACTCCATGTGTCAT GGCCTTATGAATGATTAGAAAATTACTTAAAAATTAAATTTCAAGTTAATTATAAATTTTTCAACCAATCACAAGGCCATGGTACATGGAGTGACACTAA GTGTGAGACAGGAGATGTGTACCCCTTTCCAAGAGACAACTCCAGATAACTACATTGTTAACATTTGAATATCAGATAGTACATTATCGACCATTTATTT GTATTACTATTTTTGAAAAGTATAATTAAATATGAATGATGAATATTGTAGTGACATGTATCAAATTCATATACATGCATACATTTTTTTCTTTTCTTTT AATCTCTTTATATAATGACTGTCCTTGTATTATAGGGTTTCTTGTATCTTTTGTGCTTTTATTAAGCCTGAGGCAGTGAACTGGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_175177; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280513
| Blastp | DEAD-box ATP-dependent RNA helicase 51 from Arabidopsis with 64.17% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 51 from Arabidopsis with 69.65% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (AT3G18600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437092.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |