Id Trinity | TRINITY_DN50173_c2_g3_i7 |
---|---|
Name Transcript | Ll_transcript_279758 |
Sequence | CCGTTGTAGTCGCAGGTCCGAAAGCAACCCGGAGGGCCCAGCACTCAAGTTTCTGGATTTGCACTAACCAGTTGGTATTATTACTACGACGGTACAAGAT TTGGAATCCATTAATTCTCAGCAGCCACCACCATGGCTCCAGGTTCAGCCCTGTCGCCACCTCAAGTTCCGATGGAGCTACATCTCAAAAATCGTCACAA GCTTCTAGATTCCCTTCGCCAACACCTATCTCTCTCTTCTCGTCCTCTTCACGGTTTCGTTCTCCTTCAGGGCGGTGAAGAACAAACGCGTCACGACACC GATCACCTCGAACTTTTCAGACAGGAGAGTTATTTCGCGTACTTGTTTGGAGTCAAAGAACCTGGTTTTTACGCAGCTATTGACGTTGCAAATGGGGAAT CTATCCTATTTCCTCCTAGGTTACCTGATGAGTATGCTGTTTGGTTGGGAGAGATAAAGCCACTCCCCTATTTTAAGGAACACTACATGGTTAACACAGC ATACTTTGCTGATGAAATTGCAAGTGTTTTGCAACAACGTTACCAGGGTTCAGGGGCACCCTTACTATTTCTCTTGCATGGCCTTAACACTGATAGCAAT AATTTCGCTAAACCAGCAGAGTTTCAGGGAATTGATAAGTTTGATAAGGATTTGACTACTTTGCATCCTATATTGACTGAATGCCGTGTCATCAAGACAG ACCTTGAGATTTCTCTTATTCAATATGCCAATAATATAAGCTCTGAAGCTCATGTCGAGGTTATGAGAAAAGCTAAAGTGGGCATGAAAGAGTATCAGCT TGAAAGCATGTTTCTTCACCACACGTACATGTATGGTGGGTGTAGGCATTGTTCATACACATGTATTTGTGCTACTGGTGATAATAGTTCTGTTCTTCAT TACGGGCATGCAGCAGCTCCTAATGACAAGACTCTGGAAGATGGTGACATAGCACTGCTTGATATGGGAGCTGAATACCACTTCTATGGGTCTGACATAA CATGTTCTTTTCCTATAAATGGAAAGTTTACTAGCGACCAATCTCTTATATATAATGCTGTCCTTGATGCTCATAATGCTGTTCTATCTGCAATGAAACC TGGAGTGGGCTGGGTTGATATGCACATGTATGATTGAGTTCCAATACCAGTATTGCTTCTTTTAAGTACGAGTAACCAAAATGTCTGCCAGGCTTGGTTC TTAATAACTATAATTATATCGGTTTTGCTAATCATTGCCCAAAAAATGTTTGCATTTGAAAACACAGTATTTTCTCTTGCCCCATTAAATACTCCAATTC CCAATACAATTTTACTTTTTTGGGTTCCTTAACCACTGCCCCTGCAAAACTATATTTATATCAGTGCTTTACCATAGGAAAGTTTATTGACTATTTAACT TGGTTGATGGGTAGGAGTTTAACAGAATCGTACCGTAGGTAATCTGTCACCAGGTTTTTTGAGAAATTATTGGATTTGTCTTGAATGGGATAACCTAAGA GTATATTACTTGTCATAGTAAGAACCATTAGACTATGTTTTGAAGTTAGCAACATTGGTCTGCAATACTGTAGCTGAGTTATTTTTCATGGGAATGAGTG CATGTGTATTTGTGATATTATAGGCTGATTTTGAAGTGAAGTTATGGTTAAAATCACAACGAGTTAGTTATACATGGATGAGAGTAAGTCTGGATGAATT GACCAAAATATCCATGTGCGAACAAATTTTTTGTATTGAAAAAAGTTATTTGTTATTCAAACTACTAATTTATTCCTGTGCCTAAGTATCATGCATTGTT GCTCATTTCCTATCTAAAACTGCAGATTGGCAGAAAAAGTTATCCTGGAGTCACTAAAGAAGGGACAGATACTTGTTGGGTAATGTTTATTATCTGTGGG TGGCTAACTTGTATATTGATACAATCTCTAGGATCTTTTGTGAAATAGCATATTGTGATTTTTGGCGCAGTGATGTTAATGACATGCTGTCTGCACGCTT GGGTGCTCTTTTTATGCCACATGGTCTGGGGCATTTACTTGGTATTGACACACATGATCCAGGTGGTTACTTGAAGGTATTTGGGAAAATTTAGCTGCAG TTACATTCTAAAGTGTCCCTTCTTGAATCTTCAATTAGTGGCTTATATATTCGTCTTGTAGTCAAGTCAAATTATTTTTCATATAATATCTTGGAAATTT GGTTCTGATTTGCAGGGCCCGGAAAGAAGAAAGGAACCAGGGTTAAAATCCTTGCGTACAGCCAGAGAGCTCCAGGAAGGAATGGTTATCACTGTGGAGC CTGGATGCTATTTTATTAATGCTCTGTTACTTCCAGCCATGAATAGTCCAGAAACTTCCAAGTTCTTCAACCAGCAAGTGATTAAGAAATTTAATGGTTT TGGCGGAGTCCGAATTGAGAGTGATGTGGTATTTTCCATTCTCTAAACCTCAATATGGATTACTTTGTTTATAGTTTATCATTTCTATCTTTTCAGTTAT ATTGTTGAAGTTAATGGTTTTTCTTAAATCTTAACCTATCATGCATATTTTCATTTTTCAATACTGCATCATGTTTCTCTTTTCTTTTATCAAATTCCGG GTGAAGAATATAAACTCTTCTCCCTTTCTAGTGATTAATCGCAATATTGTTCTGAAAATGTGCCGCGATTCTGACATACGAGTTTATTTGTTTACTTTAT TTATGATGTACTCAGCTTGTTACTGCTGCTGGTTGCTACAATATGACCAAGTGTCCCAGGACAACACAGGAGATCGAGGCAGTCATGGCCGGGGCACCAT GGGACATCTCCAGCTAATAAAACCTCTCTTTGTGTGAGCAAGTCTCCTTTAGTTTTTATTTTGAGTTTTTGAAATTATTCCATTTTATTCGTCTAGGTTC AAGTGCTTTTTAAGTTAAAAGTGCTTAAATCATGACATAATTACTATGTAACCTTTCAATCAGACATTAATTCTTCATACATTTTACAAGATACTGGAAC CCCAGAAATAATTGAGAAAAGTACATGTACTTTTAATGGCAGAATATAGTTAACTCTCAAATAATGTACAACTCAGTCACTAAGCACATCCACATGAAAA GGGTCATGAATTTCGTTATAGCTTTGCTAGTATACATTGATAGCTTGTAGCTAGAAGGGATAGATTATGAAATACAAACTCTGAAGGGAAATCATGCTCG TCTCCACCAGCTTCAGCATGCCT BLAST |
Tissue | pods |
Gene name | LI_gene_175193; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279758
Blastp | Xaa-Pro dipeptidase from Mus with 54.21% of identity |
---|---|
Blastx | Xaa-Pro dipeptidase from Mus with 52.98% of identity |
Eggnog | peptidase M24(COG0006) |
Kegg | Link to kegg annotations (18624) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446426.1) |
Pfam | Aminopeptidase P, N-terminal domain (PF05195.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |