Ll_transcript_280102

• Id Trinity: TRINITY_DN50174_c1_g1_i17
• Name Transcript: Ll_transcript_280102
• Sequence: CACACACCTTTTTTTCACTATACACGTGTTACTTTTCGACATGCATGCCCTTCTACCAAACAAATAATTGGTTCACAATATCTACAAAACGGTGTCGTAT AGTGTATGCTAGAGCTTTCCCAAAAACACTACGTGGCAATCGTTACACTTGAATGATTGAATCTGTAATCCTTTTTATCAAACCCTAACTTCCTAATTCT CTGAATTTTGGGCATGGCTAAGACTTCTTTCAAGCTCCAACACCCGCTTGAGAGGAGGCAGGTTGAAGCTGCTCGTATAAGGGAAAAGTATCCTGATAGA ATTCCAGTAATTGTTGAAAGGGCTGAGAAGAGTGATGTTCCGGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGCCAGTTTGTTT ATGTGGTGAGGAAAAGAATCAAACTGAGTCCTGAGAAGGCCATCTTCATCTTTGTCAATAACATTTTGCCACCAACAGCGGCTATGATGTCGGCACTATA TGATGAAAATAAGGACGATGATGGATTCCTGTATATGACTTACAGCGGGGAGAACACATTTGGGATCATGATCTGAAATGTTAACAAACATGAACCATGT GAATAGAACTTCTTGAAAACAAAACAACTAATGTGTAGTCACTCAGTTGTATATTTTGTCCTTTGAATTATTTATCTATGTTCTGATCATCACGGGCATT ATAAATACTAGAACCAGAAGAAAAGGGTGTTACTTTTTTTTTTTTTTTTTTTTTTT
• Tissue: pods
• Gene name: LI_gene_175198;
• Additional information: details;

Expression of Ll_transcript_280102

FPKM

• PAB: 206.3
• PNAB: 41.2
• PS1: 47.5
• PS2: 34.1
• PS3: 55.7
• PW1: 43.6
• PW2: 61.3
• PW3: 48.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_280102

• Blastp: Autophagy-related protein 8c from Arabidopsis with 86.55% of identity
• Blastx: Autophagy-related protein 8c from Arabidopsis with 86.55% of identity
• Eggnog: Microtubule-associated protein 1 light chain 3(ENOG4111JAT)
• Kegg: Link to kegg annotations (AT1G62040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447738.1)
• Pfam: Autophagy protein Atg8 ubiquitin like (PF02991.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;