| Id Trinity | TRINITY_DN50174_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_280080 |
| Sequence | CACACACCTTTTTTTCACTATACACGTGTTACTTTTCGACATGCATGCCCTTCTACCAAACAAATAATTGGTTCACAATATCTACAAAACGGTGTCGTAT AGTGTATGCTAGAGCTTTCCCAAAAACACTACGTGGCAATCGTTACACTTGAATGATTGAATCTGTAATCCTTTTTATCAAACCCTAACTTCCTAATTCT CTGAATTTTGGGCATGGCTAAGACTTCTTTCAAGCTCCAACACCCGCTTGAGAGGAGGCAGGTTGAAGCTGCTCGTATAAGGGAAAAGTATCCTGATAGA ATTCCAGTAATTGTTGAAAGGGCTGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTAAGTTTTGTTCTAGTTTTTGAAAATAGCAAGTATAAGTA TTGGTGTAGTTTGTAACTGGTTTTCTTCTCAAGTATTGTTACCTCTGTTAGCATTAGCATACTTAATTTGGGGTTGAGGTGTAACCTGTTCTGAAGACTG ATAAAGTTTGGTTGCTTTTCCATGAATTTTTTGGCATGAAATTGGAATGTTAGGGAACTTGCAAACTTTGACTTCTAGTTTTATTTTATTGAATTGGGTA TAGAAGTTAGACAGATAAGCTGTTGATTAATTTTTAATATGATGAACATAGGAAGAACCCTTGTCTTCTGTTCTTTGCTTAAGAATAGTAGTGAGTAGAA AAACCCAATTACGATGTTCAATTCTATGCTATTTATATCGGTATATGTCTGTGGTTTCATACTTTCATGGATGTGAAATCCTACTAATAGATTTCGACAT CGCTTCAGTTATACCAATTGAAGGAAATAGAGTGGCAAAATCTGGTATGTTGTAAATATGTATTCCCATCATGCATATCCTCTGTCTCTTTTCTGACTGG ATTACAATTTTACCTATGCTTATTATTTCTGGTTCTCCATACAGCCTTTTGGTTTAGCTTCACAGCCTTCATTATAAATATAAGAGGTTGGATGACCAAA AATTAAAATAGTTTTAAAAAATGATCTTCGAATGTGGAGAAAGTAAGCAACAAAAGGGACTACAGAATACAATTCTTTAGTAGATATGGCCATATGGGCA TATTTTAATAAGCCCTATGCTTCCTTTTGCCTCTGTTAGATGCATTAAATTCTTATTCTACTCAAAATATGGACAATAGTCAGAGTATTCTACTGTGTAT TACAAATTGTAGATACTAATTTCTTCCATTCATGATAATACCTTTTTTCTCCTATTAATTTATATTGTTCTGTGTTGGATGATTATAGGTATCTGGTTCC TGCTGATCTGACTGTTGGCCAGTTTGTTTATGTGGTGAGAAAGAGAATCAAACTGAGTCCTGAGAAAGCCATCTTCATCTTTGTCAAGAACATTTTACCA CCAACAGCGGCTTTGATGTCTGCAATATATGAGGAAAATAAGGATGAAGATGGATTCCTGTATATGACATACAGCGGGGAGAACACATTTGGGGTCATGA TCTGAAATGTTAACCAACTGCAACCATGTGAATACAACTTCCTGAAGGAAATAACTAATGCGTAGTCATCTCAGTTGTATATCCCTCCTTTGAACCATTT CTCTATGTTCTGAACCATAACAATCATTATGAATACTGCAACCAGATGATAATGGCCTTACGTTTCTATCTAAAATTGCATGTTCATGAAGTTTTTATTA TTTTCACCCACAAAATCATCATACAATTCCTGTTATATCATAAGTAAATTAATTTTATTCCATTGGAGGTGCCATTTGTGGATATTGAAAATCATAGTTT ATACACTTGAGCTTGCGAGTTCTGCAAGCCCTAGGGAACCTCAAATATAGCCCCTTTTCTTTCAAAGTTTAACAAATTTGACTGTAAACACAGCTTAGTA GATAGTATTATCATGAGAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175198; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280080
| Blastp | - |
|---|---|
| Blastx | Autophagy-related protein 8B from Oryza sativa with 90.67% of identity |
| Eggnog | Microtubule-associated protein 1 light chain 3(ENOG4111JAT) |
| Kegg | Link to kegg annotations (4337052) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457254.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |