| Id Trinity | TRINITY_DN50174_c1_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_280081 |
| Sequence | TGTTATTATACTTTTTCCCTAAAATTCAAAAATAAATATCACTTTTTTCTATTAATAGAAAGGTACTCTTCCCGAATAGGAGTTAGGGATTTGTAATTTG TAAAATTATTTGTTGCCATGGCTAAGGCTTCTTTCAAGCTCGAACACCCTCTTGAAAGAAGGCAGGCTGAAGCTGCTCGCATTAGGGAAAAGTATCCTGA TAGAATTCCAGTAATTGTTGAAAGGGCTGAGAAGAGTGATGTTCCGGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGCCAGTTT GTTTATGTGGTGAGAAAGAGAATCAAACTGAGTCCTGAGAAAGCCATCTTCATCTTTGTCAAGAACATTTTACCACCAACAGCGGCTTTGATGTCTGCAA TATATGAGGAAAATAAGGATGAAGATGGATTCCTGTATATGACATACAGCGGGGAGAACACATTTGGGGTCATGATCTGAAATGTTAACCAACTGCAACC ATGTGAATACAACTTCCTGAAGGAAATAACTAATGCGTAGTCATCTCAGTTGTATATCCCTCCTTTGAACCATTTCTCTATGTTCTGAACCATAACAATC ATTATGAATACTGCAACCAGATGATAATGGCCTTACGTTTCTATCTAAAATTGCATGTTCATGAAGTTTTTATTATTTTCACCCACAAAATCATCATACA ATTCCTGTTATATCATAAGTAAATTAATTTTATTCCATTGGAGGTGCCATTTGTGGATATTGAAAATCATAGTTTATACACTTGAGCTTGCGAGTTCTGC AAGCCCTAGGGAACCTCAAATATAGCCCCTTTTCTTTCAAAGTTTAACAAATTTGACTGTAAACACAGCTTAGTAGATAGTATTATCATGAGAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_175198; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_280081
| Blastp | Autophagy-related protein 8C from Oryza sativa with 90% of identity |
|---|---|
| Blastx | Autophagy-related protein 8C from Oryza sativa with 90% of identity |
| Eggnog | Microtubule-associated protein 1 light chain 3(ENOG4111JAT) |
| Kegg | Link to kegg annotations (4344857) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457254.1) |
| Pfam | Autophagy protein Atg8 ubiquitin like (PF02991.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |