| Id Trinity | TRINITY_DN50175_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_279547 |
| Sequence | TTGCTTCGACTTCGTAAACGGTTCGAGAGCGGAGTTCACCTGGTTTTTCAACGCCCCGTCCATCGCCACCGTGTCGAAGCTCGCAGGATGGTTAAACGGC ACAGATCGCCAACGCGACCTGTCGCCGGCGCCGGTGTTTATATACAGGTTGATTTCCTTGCGACGCTGTTCTATCTCGTCCGCTACTGAGAGAATGTGCT GGAAGTACTGTAAGAAAATCCTGCGCTTGTCTTTCTTCTTTATCCGGAGCACAAGCGCGGCGGAATCGGAGTCGCCGCCGCCGGTTGATACAGCGTGTTT AGCCCACCGGAGCTTTGCGCCGAGGAAGGTATCTTCGACGACTTGGTTTGCACCGAGTTGGAAGAAAATATCGGAGGGGTTGTTACCGGAGAAGAGGTTG GTGAAATCGGAATCCTGAACGGAAGTGAGAGAATCGAGGTATGTGATGATTTTCCGGTAAAGTTGATTTTCCTGAAAATTTTGATTGTAGAGTGGGACTT TGAAGGATTGGTACACGTGGAAGCGGTTTTCAAAGGAGAACCACCATTTGTTGAGGATGTGAAGTGTTGAGGTTTTTCGGAAGAAACAAAGAATTAGGAA AGAGAAAACTAAGATGAAGAAAATTGGGAAAAATAACCAAATCATGTTTGATTATTTGGTTGAATTTGAAAGATGAAATTATTATAAGCTAAGATTGGAA AAATGAATAATCATGCAAGTATATGGGTTGGAATAACTGGGGAATGTTGATGTTAATGAAGCTTTTGATGTATTATTCAACTTTGAAGAGGTCATTGCTA CCTAAGGTTGCTCATGTGATTTCAAAACCAAGGTGATACTTTACAGGGAATGATACATCATTCCCAAGTTGTCTTAATCAACCAGTCCATGGATGAAGAT CTCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_175203; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_279547
| Blastp | AAA-ATPase At2g46620 from Arabidopsis with 44.89% of identity |
|---|---|
| Blastx | AAA-ATPase At2g46620 from Arabidopsis with 47.76% of identity |
| Eggnog | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465) |
| Kegg | Link to kegg annotations (AT2G46620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414918.1) |
| Pfam | Domain associated at C-terminal with AAA (PF14363.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |