| Id Trinity | TRINITY_DN50178_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_278947 |
| Sequence | GGAGAATCCAATTAGTCTCTTGAAAGTGTAATGTGTGGTATGTGTTCCTTTTGGGATCCCAATCAGCAAATTTCTGACCAAGTATCTTGATAGCAATTGA GAACCTTGCTCACATGGCAACCAATAAAACCATTGGCCTACACTTAAACCATCCAATAAGATATCACCTTATCCTATCCGTTATCTTCACTCACATCACA CAACTGCCACCAAATAATTACCCATTGTCCATTCTCCAGCACACAAAAACACTTACAAACTAGCATACTTAGTTTCCACAACACAAAAAGAAACACTGAG AACAGTGCTGTGGCAATAGCAGCAATGGCAGCATCACTACAAGCAGCTGCAACTTTCATGCAACCCACCAAATTTGGCCGTAGCAACACTTTGCAGCTCA AGTCTAATCACTTAGTTTCTAAGGCATTTGGAGAATCCTCTGGAACTAAGGTCACTTGTTCCCTTCAGGCTGATCTAAAGGACTTGGCTCACAAGTGTGT TGAAGCCACCAAAATTGCAGGGTTTGCTCTTGCTACCTCTGCTCTAGTTGTCTCTGTATGTTGCTTTAACCCTCTTCTAAATATTCTTTGATTCACTGTT ATATTCATCCATTTCATTAAAAATGGTGTCTTTTTTTTCTGTTTAATTTCAATTATGACATAGTTCAAGGTTCCACTATAACATCCTAGCAGTGTTTTAA AATGTGGACCGCATCACGTGATACCAAATCACAGTAACACAACCGCAACTGTCGTAATGATCGCAATTGCAGTAAACGCAACCGCAATTTAAAACACTGA ATCCTAGGAATTCCCTGAACTGGATTTAGACTTGGGCCTTAGACTATATACTTTCATCGTCTGCAAAAAAAAATCAAAGTTCTGTTTTTTTCTTTTAATG CTTTGTTATTGTTTAATTAAATGTGATGAATGATGTAGTTGTATGCAAGTTACTAAGTTGTAACAATCAATTTGATTAAGGAGGTCAATGATAAACAAAA TTGAAATCCAATCAAATTATCTTATAATTAATAATCTATATATGTATATAGTGTACATTAATAATCTATCTGTAATTTGACATTTTTAACTGAAGAGCTT TATGATCATGATGCCAACTACTCCTTTGATATGCAATCTGCACCATATATTTTCTCTAGACAGAAATCTTGTATAAAAGTTACTAAGTATCAGTCCCTTT GTCACCAATGAGTGTAGAAGATTTCAGTTTCACTTGTCTGTGATACTAATTCAAGTAATTAAATGTTGTTGGGATGTTTGAAATATATTATTATGAGAAG TCTCAAATTATCTATTATTGTAGTGGAGGAAAGAGGTCAAAGTTATAGATTGGACTTAAGTTCTTTGTTATAACTTACACCAATTAGAAGCACCATATGA GTTTTGAGTCATGAGTGTGCTAGAGCTTGTACTCCTACTATATAATAATATGTTAGTAGCTTCTCAACCCTCCCGGTGACATAAACACAATTGTTCGAGC TATGTTAACAAATTATATTGTCTTATTCTCTTATATTTATTCTTATTCCCTTGATTTAATTACTCGTGGTTAAAGCTGCACATTGGTCGCTTCAGTTGCG TCAACATTTGTATCGTGGCCAATTGATATTTGACATTTAACCCAAGGGCCATATTCATGGTGGAGAAATTCAAATGAACTTGTAACTTTGAAGTGTGGCA AACAAAGGTGAAAGATGTGTTGGTTTGACAAGGTATGTCAAAGGTTGTAGGTGAGCATATGGTAAAATCATGGTGGGGAACACATTCATGTTGGATCTAG AACCTCAAATGTTTATGTATTGGATTGCGACCTAAGTGGAGCATCAAACTATGAGACAAGTTCTAGGAATATCTCTGTAGGTGTTAGAGATGATGATATC ATTTGTGATGAGAAATTGTGTATCCTTATGGTGTTTACATGGCGTTATGGGTAATGATGTTAATTGTTAGCAGGCCCATAAAATCACAAGAGCATTAGCT GACTTTGATACAGGGTATAACACATGCATTAACGTGGATGCAAGGTGTAACATGAGCATTGATAGAGATGCAAGTTGTGACACGGACATTGGCTTGTATA GAAGAGGTGTGACACATGCATTGCTTGACATTGGCACAAGGTATGTTGTGGGTATACTCCTTAAAATGAAGTATGATAGTTCTTTTGGATTATGATTGTC AGAGTAGACAATGGTGGTAGTGGTTGGGGCTTTCGAAGAAGCTCCAAGTTTTAGATTGACTGAGTTTTGAAACGGCAATTGTTGGTGAGATTTGGTGATA TGGAGGTTCACATCATATGTATTGCTCTACGAGATTGAGGTAGCTATGCTCGAAATTTGAAGAAGAGTTGCTCTTGGCGACATCGTCAAAGATGCTAGGA AAGACTTATGTTAAAGGGGGACATGCTCTTATATGGAGGAGATGATAAAGAGCGCTATACATTTAGCAAGATAAAGCGGAAAATTCATTAAGATAAAGAT TATTGCATAGGAAATTTCCTAAGGAACTATTTATTTTCTCTCCATTTATTCTTATACCCTTTATTTGATATCGCTCATGGCCTACACCCTGCAACGAATG CTTCCACTACACCAACAAATGTTAACTTAGATTTGCCTATTAAGACGTGTTTACTAGTTCACCAAGAGTTTCTTATGTAATTTTTATGCAAGGAAAAATC CTTTTGTCTATTGTCTACTAACCCTTTTTACATTGAACATACCAATAAATACATAAACTTATGACCTATTGCTTCTCTATTTGTAACATGCATATAAATA GGACTCTTTTAGAGAAAAATCCTATTGATCTATTTAGTACATGAGTGACTGTTAACCTTGTTCAATGTTCAGGGAGCAAGTGCTGAAGGTGTTCCAAAGC GGCTAACCTACGACGAAATCCAGAGCAAGACATACTTGGAAGTGAAGGGTACCGGAACTGCAAACCAGTGCCCAACTATTGATGGTGGAGCAGACTCATT TTCCTTCCCTGCTGGCAAATACACTGCCAAGAAGTTGTGCCTTGAACCTACTTCATTCACAGTCAAAGCTGAGGGTGTAACCAAGAATGCCCCACTTGAA TTCCAAAACACCAAACTCATGACCCGTTTGACCTACACCCTTGATGAGATTGAAGGGCCATTCGAAGTTTCACCCGATGGCACAGTCAAATTCGAGGAGA AAGATGGCATTGACTATGCTGCAGTCACAGTCCAGCTCCCGGGTGGCGAGCGTGTCCCGTTCCTTTTCACCATCAAGCAATTGGTGGCATCAGGGAAGCC AGAGAGCTTCAGTGGGGACTTTCTAGTGCCATCATACCGCGGTTCGTCTTTCTTGGACCCCAAGGGAAGGGGTGCCTCGACAGGCTACGACAACGCGGTT GCGTTGCCTGCTGGTGGAAGAGGAGATGAGGAAGAACTAGGCAAGGAAAACAACAAAAGCGCTGCTTCATCCAAAGGGAAAATCACGTTGAGTGTGACCA AGAGCAGGCCTGAGACTGGTGAGGTTATTGGAGTGTTTGAGAGCATTCAGCCTTCTGACACTGATTTGGGAGCTAAAGCTCCTAAGGATGTGAAGATCCA GGGCGTATGGTATGCTCAGCTTGACTCATAGAGAGGCTCTTTTTTTATGCTTTCAATTTGTATTTTGTTGGTTCAGATTTTGATGTAACTCCTAAAGATG TTACTGAATTGTCGTTTGACCAAATTGGAATTACCATCATGTTTGTATATGATGCCTATTTTCAAATAGTACTATAAAAACTGGTTGGGACTAGCTACTC CTATCCGCTCAACCGGAAATTGGATATCAAATCAATTTGATTCTCTCACCTTGACGGTTAATTTAAATCTAAAATTGGTGAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175218; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278947
| Blastp | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 95.29% of identity |
|---|---|
| Blastx | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 92.91% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000045) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446753.1) |
| Pfam | Manganese-stabilising protein / photosystem II polypeptide (PF01716.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |