| Id Trinity | TRINITY_DN50178_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_278939 |
| Sequence | TACATTTTCAAACATTAGAAGTGAAATGTATGCATATATATATATATATATATGTTTATATAAACAGTATAGAGCATGAACATTTTCTTTCAGATGAAAC ACCTTGAAATTTCTCCTATTGATCTGCTTAGTTACATGAGTTGATAAATATTCAGGGAGCAAGTGCCGAAGGTGTTCCAAAGCGGCTAACATACGACGAG ATCCAGAGCAAGACATACTCAGAAGTCAAGGGGACTGGAACAGCAAACCAGTGTCCAACCATTGATGGTGGAGCAGACTCATTCGCCATCTCGGCGGGCA AATACAATGCCAAGAAGTTCTGCCTCGAGCCTACTTCGTTCACGGTCAAGTCAGAGGGTGTAACCAAGAACGCTCCACTCGAATTCCAAAACACGAAGCT CATGACCCGTTTGACCTACACCCTGGACGAAATCGAAGGGCCATTCGAAGTTTCACCCGATGGCAGTGTCAAATTCGAGGAGAAAGATGGCATTGACTAC GCTGCAGTTACAGTTCAGCTCCCTGGTGGCGAACGAGTCCCATTCCTTTTCACCATCAAGCAGTTGGTTGCATCAGGAAAGGCAGATAGCTTCAGTGGAG AGTATCTAGTACCATCATACCGCGGTTCGTCTTTCCTGGACCCGAAGGGAAGGGGTGCCTCTACAGGTTATGACAATGCAGTTGCATTGCCTGCTGGTGG AAGAGGAGATGAGGAAGAACTTGTCAAAGAAAACAACAAAAGTGCTGCTTCATCCAAGGGGAAAATCACATTGAGTGTGACCAAGACCAAGCCCGAGACC GGCGAGATTATCGGCGTGTTTGAGAGTCTTCAGCCTTCTGACACTGATTTGGGAGCTAAAGCTCCTAAGGATGTGAAGATCCAAGGTGTTTGGTATGCTC AGCTTGACTCATAGAGAGGCTCTTTTTTTATGCTTTCAATTTGTATTTTGTTGGTTCAGATTTTGATGTAACTCCTAAAGATGTTACTGAATTGTCGTTT GACCAAATTGGAATTACCATCATGTTTGTATATGATGCCTATTTTCAAATAGTACTATAAAAACTGGTTGGGACTAGCTACTCCTATCCGCTCAACCGGA AATTGGATATCAAATCAATTTGATTCTCTCACCTTGACGGTTAATTTAAATCTAAAATTGGTGAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_175218; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278939
| Blastp | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 95.29% of identity |
|---|---|
| Blastx | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 91.73% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000045) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421163.1) |
| Pfam | Manganese-stabilising protein / photosystem II polypeptide (PF01716.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |