Id Trinity | TRINITY_DN50178_c0_g1_i9 |
---|---|
Name Transcript | Ll_transcript_278946 |
Sequence | CAAGCTTGCAAAGGTGGCAAAGGAAGAAAAGTATTGGCATTAGCTTGAACCATCCAATAAGATATCACCTTATCCTATCCATTATCTTCCCTCACATCAC ACAAGAGCCACCAAATAATTGTCCCCTCCTCATTCTCCAACACAAAAACACTTCCAAACTACATAGTTTGGAAAACACTGAGAACATTGGTGTGACAATA GCAACAATGGCATCCTCACTACAAGCAGCCGCTACTTTCATGCAACCCACCAAGTTGGGCCGTAGCAACACTTTACAGCTCAAGTCTACTCACTCCATTT CTAAGGCTTTTGGGTCAGAATCCTCTGGAGCTAAGGTCACTTGCTCCCTTCAGGCTGATCTTAAGGACTTGGCTCACAAGTGTGTTGAAGCCACCAAAAT TGCAGGGTTTGCTCTTGCTACCTCTGCTCTAGTTGTCTCTGTATGTTGCTTTAACCCTCTTCTAAATATTCTTTGATTCACTGTTATATTCATCCATTTC ATTAAAAATGGTGTCTTTTTTTTCTGTTTAATTTCAATTATGACATAGTTCAAGGTTCCACTATAACATCCTAGCAGTGTTTTAAAATGTGGACCGCATC ACGTGATACCAAATCACAGTAACACAACCGCAACTGTCGTAATGATCGCAATTGCAGTAAACGCAACCGCAATTTAAAACACTGAATCCTAGGAATTCCC TGAACTGGATTTAGACTTGGGCCTTAGACTATATACTTTCATCGTCTGCAAAAAAAAATCAAAGTTCTGTTTTTTTCTTTTAATGCTTTGTTATTGTTTA ATTAAATGTGATGAATGATGTAGTTGTATGCAAGTTACTAAGTTGTAACAATCAATTTGATTAAGGAGGTCAATGATAAACAAAATTGAAATCCAATCAA ATTATCTTATAATTAATAATCTATATATGTATATAGTGTACATTAATAATCTATCTGTAATTTGACATTTTTAACTGAAGAGCTTTATGATCATGATGCC AACTACTCCTTTGATATGCAATCTGCACCATATATTTTCTCTAGACAGAAATCTTGTATAAAAGTTACTAAGTATCAGTCCCTTTGTCACCAATGAGTGT AGAAGATTTCAGTTTCACTTGTCTGTGATACTAATTCAAGTAATTAAATGTTGTTGGGATGTTTGAAATATATTATTATGAGAAGTCTCAAATTATCTAT TATTGTAGTGGAGGAAAGAGGTCAAAGTTATAGATTGGACTTAAGTTCTTTGTTATAACTTACACCAATTAGAAGCACCATATGAGTTTTGAGTCATGAG TGTGCTAGAGCTTGTACTCCTACTATATAATAATATGTTAGTAGCTTCTCAACCCTCCCGGTGACATAAACACAATTGTTCGAGCTATGTTAACAAATTA TATTGTCTTATTCTCTTATATTTATTCTTATTCCCTTGATTTAATTACTCGTGGTTAAAGCTGCACATTGGTCGCTTCAGTTGCGTCAACATTTGTATCG TGGCCAATTGATATTTGACATTTAACCCAAGGGCCATATTCATGGTGGAGAAATTCAAATGAACTTGTAACTTTGAAGTGTGGCAAACAAAGGTGAAAGA TGTGTTGGTTTGACAAGGTATGTCAAAGGTTGTAGGTGAGCATATGGTAAAATCATGGTGGGGAACACATTCATGTTGGATCTAGAACCTCAAATGTTTA TGTATTGGATTGCGACCTAAGTGGAGCATCAAACTATGAGACAAGTTCTAGGAATATCTCTGTAGGTGTTAGAGATGATGATATCATTTGTGATGAGAAA TTGTGTATCCTTATGGTGTTTACATGGCGTTATGGGTAATGATGTTAATTGTTAGCAGGCCCATAAAATCACAAGAGCATTAGCTGACTTTGATACAGGG TATAACACATGCATTAACGTGGATGCAAGGTGTAACATGAGCATTGATAGAGATGCAAGTTGTGACACGGACATTGGCTTGTATAGAAGAGGTGTGACAC ATGCATTGCTTGACATTGGCACAAGGTATGTTGTGGGTATACTCCTTAAAATGAAGTATGATAGTTCTTTTGGATTATGATTGTCAGAGTAGACAATGGT GGTAGTGGTTGGGGCTTTCGAAGAAGCTCCAAGTTTTAGATTGACTGAGTTTTGAAACGGCAATTGTTGGTGAGATTTGGTGATATGGAGGTTCACATCA TATGTATTGCTCTACGAGATTGAGGTAGCTATGCTCGAAATTTGAAGAAGAGTTGCTCTTGGCGACATCGTCAAAGATGCTAGGAAAGACTTATGTTAAA GGGGGACATGCTCTTATATGGAGGAGATGATAAAGAGCGCTATACATTTAGCAAGATAAAGCGGAAAATTCATTAAGATAAAGATTATTGCATAGGAAAT TTCCTAAGGAACTATTTATTTTCTCTCCATTTATTCTTATACCCTTTATTTGATATCGCTCATGGCCTACACCCTGCAACGAATGCTTCCACTACACCAA CAAATGTTAACTTAGATTTGCCTATTAAGACGTGTTTACTAGTTCACCAAGAGTTTCTTATGTAATTTTTATGCAAGGAAAAATCCTTTTGTCTATTGTC TACTAACCCTTTTTACATTGAACATACCAATAAATACATAAACTTATGACCTATTGCTTCTCTATTTGTAACATGCATATAAATAGGACTCTTTTAGAGA AAAATCCTATTGATCTATTTAGTACATGAGTGACTGTTAACCTTGTTCAATGTTCAGGGAGCAAGTGCTGAAGGTGTTCCAAAGCGGCTAACCTACGACG AAATCCAGAGCAAGACATACTTGGAAGTGAAGGGTACCGGAACTGCAAACCAGTGCCCAACTATTGATGGTGGAGCAGACTCATTTTCCTTCCCTGCTGG CAAATACACTGCCAAGAAGTTGTGCCTTGAACCTACTTCATTCACAGTCAAAGCTGAGGGTGTAACCAAGAATGCCCCACTTGAATTCCAAAACACCAAA CTCATGACCCGTTTGACCTACACCCTTGATGAGATTGAAGGGCCATTCGAAGTTTCACCCGATGGCACAGTCAAATTCGAGGAGAAAGATGGCATTGACT ATGCTGCAGTCACAGTCCAGCTCCCGGGTGGCGAGCGTGTCCCGTTCCTTTTCACCATCAAGCAATTGGTGGCATCAGGGAAGCCAGAGAGCTTCAGTGG GGACTTTCTAGTGCCATCATACCGCGGTTCGTCTTTCTTGGACCCCAAGGGAAGGGGTGCCTCGACAGGCTACGACAACGCGGTTGCGTTGCCTGCTGGT GGAAGAGGAGATGAGGAAGAACTAGGCAAGGAAAACAACAAAAGCGCTGCTTCATCCAAAGGGAAAATCACGTTGAGTGTGACCAAGAGCAGGCCTGAGA CTGGTGAGGTTATTGGAGTGTTTGAGAGCATTCAGCCTTCTGACACTGATTTGGGAGCTAAAGCTCCTAAGGATGTGAAGATCCAGGGCGTATGGTATGC TCAGCTTGACTCATAGAGAGGCTCTTTTTTTATGCTTTCAATTTGTATTTTGTTGGTTCAGATTTTGATGTAACTCCTAAAGATGTTACTGAATTGTCGT TTGACCAAATTGGAATTACCATCATGTTTGTATATGATGCCTATTTTCAAATAGTACTATAAAAACTGGTTGGGACTAGCTACTCCTATCCGCTCAACCG GAAATTGGATATCAAATCAATTTGATTCTCTCACCTTGACGGTTAATTTAAATCTAAAATTGGTGAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_175218; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_278946
Blastp | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 95.29% of identity |
---|---|
Blastx | Oxygen-evolving enhancer protein 1, chloroplastic from Pisum with 92.91% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000045) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446753.1) |
Pfam | Manganese-stabilising protein / photosystem II polypeptide (PF01716.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |