Ll_transcript_278856

• Id Trinity: TRINITY_DN50179_c1_g1_i16
• Name Transcript: Ll_transcript_278856
• Sequence: CTTCCTAGTTCTTACCTAGTGGCTACTTGTTAGATGCAGACAAGTTGAAATTAATTTTGTTGCATATTATTTACCTATATATCAGTGGTCATGCATGAAT CTTCGAAAAACAAAATCACTTTTTGCTCTCTCTTATTATTTCTACAGATTTCATCCCCTTTAAAGGAATATCTCCCAATATTTCCTCTGCTCTTCTTTCC TTTTTTTTTCCTATTTCCTTTTGTAATCATCGAAACATCACCTTCACGTTTTATTTCCAACCTCTTTATTTACCTTTCCTCATTTTTCTTCTCTGTCTCG GCTTGAATCATTTCATAACCTTTTCAATTTGCCTAGAATTCGAACACAGAGATTGGGTTTTAACTTTTCTCTGTTCGAATTCTTTGGACTTTGTTTTCCT TCTCTTCCTCAAATCATCTATACTACAAAAAAAGCAAAGGTTTCCTGAAATGCCCTTTCTTTTCATGATTTCGGGATTCATTTGTTGATGAGATCAATTG GTGCTTAGAATGGACAGCTCAGAGATATAAATTTGAACTCAAAATTTGATTTTGAAGTTTTAAACTCTTCAATCATCCGAATTTGTGTAATTGTTTATTG TTAGAGAGGGTGGACAAAATGGCTTTTGGTTTAATCTCTGCAGTTTCAAAACTGCAAATGGTATCCACTTCGGATCATGCATCTGTAGTCTCAATGAACC TGTTTGTTGCACTTCTGTGTGCTTGTATTGTCATTGGTCATCTTCTCGAGGAGAATCGTTGGATGAATGAGTCTATCACTGCCCTTTTGATTGGTCTTTG CACTGGTGTAGTCATTTTGCTGCTTAGTGGTGGTACAAGCTCACACGTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTTCCACCTATAATA TTTAATGCTGGGTTTCAAGTGAAAAAGAAGCAGTTTTTTGTCAACTTTATGACCATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTACCATCA TAACCTTGGGTGTTTCTCAAATTTTTAAGAGGATGAATATCGGTCCGCTGGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCGACCGATTC TGTGTGCACATTGCAGGTGCTAAATCAGGATGAAACACCTTTACTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTT TTCAATGCAATCCAGAGCTTTGACCTCGAGCAAATTGACACGTCAATTGCCTCACAATTTATTACCAACTTCTTGTATCTGTTCGTGACAAGCACATTGC TCGGGGTTTTGGTAACTATCTCCCTCTAATTCCCTCATGCACACATGACAAAATTATATGAACAATATCTATATCAATAGTGAGCCTGCACATTAATATT GATATTACATGTGGCTCTGGTCTAATGTATCTCCGTCGCCTTGTAGTCAGGTCTTCTCAGTGCCTACATCATTAAAAAGTTGTATATTGGCAGGTAACTT CTTAACAGTTGTTGTCATTATCATTGTCAGCAGTTACTGAGATAGTGTTCATTATTTTGTATCATATTTATGTAGTTTATTCGTATCAAAACTAATGTTG TAGATAATTCTTGGATACCAAGAAATTGGAGTTCCTGTTTTTGCCAATCCCTATTAATCTGACAGAAAGTCTTTAGAGTTTAACGAGATTATATAGACCT TGGTTTGGTTGTTTGAATCTATGTTACTGGTTCGTTACTGCTTGCGACCAGAATAATGGGGTTCATTATATTATTATTATTTTAAATGGTGGTTTGTCAT TTGACTGGTTCTAAATGTACTGTCTATTATTAATGATGTCATACCACATAGAACTGAACAAGTTTAATTAAATACCCTGATGAATGATGCATCCCTGAAT TCTCACTGGGTACAAATTGGTATATTTTTCAATGGAGTCTTGATTTTTTATCAATGTGGCATACATTACGTTATTGCTCATGAATCTCTTAATAAGTTCC TGTTGTCTCTGTCTGTGAACCTGATGTATTTTCTTGGATATATGATTTTATAGACTTGGCTAGGGATGATTTGAAACATTTGTTTACTGAGGTTCAACAA TTTTTTCCTTAATTCCAGGCACTCTACCGATCGAGAGGTTGCTCTCATGATGCTAATGGCATACCTCTCCTACATGCTGGCCGAGTTATGCTATCTGAGT GGC
• Tissue: pods
• Gene name: LI_gene_175221;
• Additional information: details;

Expression of Ll_transcript_278856

FPKM

• PAB: 1.2
• PNAB: 0.3
• PS1: 0.5
• PS2: 0
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_278856

• Blastp: Sodium/hydrogen exchanger 3 from Arabidopsis with 77.83% of identity
• Blastx: Sodium/hydrogen exchanger 3 from Arabidopsis with 65.75% of identity
• Eggnog: Sodium hydrogen exchanger(COG0025)
• Kegg: Link to kegg annotations (AT3G06370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427838.1)
• Pfam: Sodium/hydrogen exchanger family (PF00999.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;