Ll_transcript_278842

• Id Trinity: TRINITY_DN50179_c1_g1_i2
• Name Transcript: Ll_transcript_278842
• Sequence: CTTCCTAGTTCTTACCTAGTGGCTACTTGTTAGATGCAGACAAGTTGAAATTAATTTTGTTGCATATTATTTACCTATATATCAGTGGTCATGCATGAAT CTTCGAAAAACAAAATCACTTTTTGCTCTCTCTTATTATTTCTACAGATTTCATCCCCTTTAAAGGAATATCTCCCAATATTTCCTCTGCTCTTCTTTCC TTTTTTTTTCCTATTTCCTTTTGTAATCATCGAAACATCACCTTCACGTTTTATTTCCAACCTCTTTATTTACCTTTCCTCATTTTTCTTCTCTGTCTCG GCTTGAATCATTTCATAACCTTTTCAATTTGCCTAGAATTCGAACACAGAGATTGGGTTTTAACTTTTCTCTGTTCGAATTCTTTGGACTTTGTTTTCCT TCTCTTCCTCAAATCATCTATACTACAAAAAAAGCAAAGGTTTCCTGAAATGCCCTTTCTTTTCATGATTTCGGGATTCATTTGTTGATGAGATCAATTG GTGCTTAGAATGGACAGCTCAGAGATATAAATTTGAACTCAAAATTTGATTTTGAAGTTTTAAACTCTTCAATCATCCGAATTTGTGTAATTGTTTATTG TTAGAGAGGGTGGACAAAATGGCTTTTGGTTTAATCTCTGCAGTTTCAAAACTGCAAATGGTATCCACTTCGGATCATGCATCTGTAGTCTCAATGAACC TGTTTGTTGCACTTCTGTGTGCTTGTATTGTCATTGGTCATCTTCTCGAGGAGAATCGTTGGATGAATGAGTCTATCACTGCCCTTTTGATTGGTCTTTG CACTGGTGTAGTCATTTTGCTGCTTAGTGGTGGTACAAGCTCACACGTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTTCCACCTATAATA TTTAATGCTGGGTTTCAAGTGAAAAAGAAGCAGTTTTTTGTCAACTTTATGACCATCATGTTGTTTGGTGCTATTGGTACATTAATATCTTGTACCATCA TAACCTTGGGTGTTTCTCAAATTTTTAAGAGGATGAATATCGGTCCGCTGGAAATAGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCGACCGATTC TGTGTGCACATTGCAGGTGCTAAATCAGGATGAAACACCTTTACTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTT TTCAATGCAATCCAGAGCTTTGACCTCGAGCAAATTGACACGTCAATTGCCTCACAATTTATTACCAACTTCTTGTATCTGTTCGTGACAAGCACATTGC TCGGGGTTTTGTCAGGTCTTCTCAGTGCCTACATCATTAAAAAGTTGTATATTGGCAGGTAACTTCTTAACAGTTGTTGTCATTATCATTGTCAGCAGTT ACTGAGATAGTGTTCATTATTTTGTATCATATTTATGTAGTTTATTCGTATCAAAACTAATGTTGTAGATAATTCTTGGATACCAAGAAATTGGAGTTCC TGTTTTTGCCAATCCCTATTAATCTGACAGAAAGTCTTTAGAGTTTAACGAGATTATATAGACCTTGGTTTGGTTGTTTGAATCTATGTTACTGGTTCGT TACTGCTTGCGACCAGAATAATGGGGTTCATTATATTATTATTATTTTAAATGGTGGTTTGTCATTTGACTGGTTCTAAATGTACTGTCTATTATTAATG ATGTCATACCACATAGAACTGAACAAGTTTAATTAAATACCCTGATGAATGATGCATCCCTGAATTCTCACTGGGTACAAATTGGTATATTTTTCAATGG AGTCTTGATTTTTTATCAATGTGGCATACATTACGTTATTGCTCATGAATCTCTTAATAAGTTCCTGTTGTCTCTGTCTGTGAACCTGATGTATTTTCTT GGATATATGATTTTATAGACTTGGCTAGGGATGATTTGAAACATTTGTTTACTGAGGTTCAACAATTTTTTCCTTAATTCCAGGCACTCTACCGATCGAG AGGTTGCTCTCATGATGCTAATGGCATACCTCTCCTACATGCTGGCCGAGTTATGCTATCTGAGTGGC
• Tissue: pods
• Gene name: LI_gene_175221;
• Additional information: details;

Expression of Ll_transcript_278842

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_278842

• Blastp: Sodium/hydrogen exchanger 3 from Arabidopsis with 77.73% of identity
• Blastx: Sodium/hydrogen exchanger 2 from Arabidopsis with 80.08% of identity
• Eggnog: Sodium hydrogen exchanger(COG0025)
• Kegg: Link to kegg annotations (AT3G06370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427838.1)
• Pfam: Sodium/hydrogen exchanger family (PF00999.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;