Ll_transcript_278457

• Id Trinity: TRINITY_DN50195_c12_g1_i3
• Name Transcript: Ll_transcript_278457
• Sequence: CCCCAATCATTATTCGTCATTCTCATTGGACCGTCATCTCATAACAACCCAATATCACCGCAGTAACCGCCACTGTTATCAAGGTCAATGACTTCAAAAA TGAAAAGTGCCACAACTTAATACAACTCCTTTTTCTAAGCCTTCAAATCTCTCTATACACAAAGGACTCTTTCCTCTGAATGTTTGAATGCTCTTGAGGC GCCGATGGACGAAACCGCCGTGAAATCAAAGCCTGACTGCATCAACAAGCGGACAAAAGCCTCCAGAGAATGTACCGGTGACGTCGGACGTGGCGGCGGC GATGAAGATTCCGATGATGAGGAGTGTGATGGCGAGGCTTGGAACACGCTGAGCCTGAATTTCCGGCAAGCGCAATCGGTGCTGGATCAGAACCGTGTGC TGATCGAGGAAGTGAACAAAAACCATGAGTCGAAGATTCCAGATAACATGGCGAAGAACGTTGACTTGATTCAGAAGATTAACAGTAACATTTCCAAGGT TCTTTCTATTTACTCCAATTTATCAAGCAGTTTCTCAAACAGTGTTCGTCAGCAGCGAGGTTTTGCCCCTGCAACCGCGAAGCGTAAGAATCGCGATGGA GATGGTGACGGCAATGACGAGGATGATGACAAGGTGGAGGACGTTCCGGAGCCTGTGTCATAGAAATCGGAGTAATTCTTTGTTACCTTATATTAAATGA TAATATGAATTTGATTGTTCTTGTGTTGTGTAGAGTCGATTGTGATGAAAATTGAAATAACTAGTCCTGTACTACTGTGTTAGTATTGTGTACGTGGTAG TGTCATTTGGAATGTATGGAATGGAGTTTGGTTTCAATTTCATTTGTCAGTGGAGTGTTGATTTTGATAATTTTCAATTGCCTCTGCTCATTATTGGTTT GTGTTTTTGTGGATTTTTCTTTGTTGTAAGGATGGTTGATTGAATTCATGGCTGCAGGACTGCATCCTACATTAACCACCCACAGATATGAGGTATTTAT GTTGTATTTGATTTTGGCCCACTGGACCTGGGAGGTAGATAAGGGAAAGGAGATAGGAAGGATATTGAACGTATGGTTTAGTTTGGTAGACATTAGAATA TGGATAATCAGAAATTATGTGTTTTTGGTGGATTTCATGAACAAAAAAAAACATGACAATATAGTAAAATATTTTGGTCCTAATCTAATGATTTGTGGTA TGATATGATCTTCATTTTTCCTCTACAAGTAAGTTTGTTTGCCTCTTGCTAAACTTATCATCCATCTACCCATCTTACTTTGACTTATATGAAAGTCGTA TACTTCTAAAGTTTACCTTCACATTTATAGGACAGAACAATTTATGCTTAATTTGCTTTTCATCTCCAACAAAGCAAACATTGATTCTGCAAGCACAACC ATCTCTGGTTTTAGGGATTTCTTGTTGTCAAGTTATTTATGATGTCAGCTTTGTCTTCAAATGTTTAATCTATTTAAGACTTAACCACTGGGTCAGTCAC AATGCCATACCACAAGGCTACTCTGGTTGCTTCTCATTTATTTGGTTTGTTTAGCAAAGGGTTGACAACCAAATTAGCTTATCTGATCTAACAATAAAAT ATTTTAACAATTTCCTGGAAGGCATTAGCATATAAAATACTGCATTTACTATCGAGTGGTGCTTTTTTAAGTAAATCATGGAACTAGTAAATTCTAGAAA CTAGAGTTGCCCACTCGTGCAGGAAGATATGAAGCTAGAATGCTAGATTGTGTCGAAAAGCAGTTGCCTTACCTAAATATGGGTCGACTAACTTGTTTTA ATCTTCCATAAGTCAATATTCTCTAGTACACTGGCTATGCTTATGGTGGACATGGAATTTACAACTTCCAGGTTGACATGGGTCAGTGATCAGAGATTCA GAGGTGACTTGGTAGTTGGTAGATTTGGTTCTTTAAACAGACAGGTCTCAGCTAGAAATTGATTGAGGTAATGAGACAAATACTTGCAGGTGTGTGGTTA TCAGGCAAGAAAAATGCAATGGATGATTGGGTTGGAGGTGTTCTTCATAGAAGCTTCATTGAAGCACAGCAGAAATAACCTGAACTAATTTTTTGTGGAA CAAGCTCAAGTATGCCTTCGAGCTAGAATTAACATGAAGTAAATTTTTGCTCACTATGTATTATTGTAGTTACTTGTAAGGCCAATTAAACTTACAAATT TTGTTGTGGTAATCTGTGTTGCAGCCCCTAATATTTATGGTTAAAGGATGTGTAGTTTTCACTACTATACCTACTACCCTATGACATCTCTTCTTTTGTC AGTTGATTATAGAAGTACATTAAAGTTCGTTTGCAAGTTTTGTATCACAACAACGCTAGTTCCACTATTGTACTTTTTTTAAGTTTCTACATTCAAGTAT TACAGAAAAATTGCATTCAAGC
• Tissue: pods
• Gene name: LI_gene_175330;
• Additional information: details;

Expression of Ll_transcript_278457

FPKM

• PAB: 0.4
• PNAB: 0.5
• PS1: 2
• PS2: 1.6
• PS3: 2.4
• PW1: 2.2
• PW2: 0
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_278457

• Blastp: Protein EARLY FLOWERING 4 from Arabidopsis with 60% of identity
• Blastx: Protein EARLY FLOWERING 4 from Arabidopsis with 62.75% of identity
• Eggnog: early flowering(ENOG410Y56Z)
• Kegg: Link to kegg annotations (AT2G40080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460517.1)
• Pfam: Protein of unknown function (DUF1313) (PF07011.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;